RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PMS2CLQ68D20 193 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ANO7Q6IWH7 933 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 RRAGAQ7L523 313 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ANKS1BQ7Z6G8 1248 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 LRRTM4Q86VH4 590 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 CREBRFQ8IUR6 639 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ARID3BQ8IVW6 561 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 OR4N4Q8N0Y3 316 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 HDDC3Q8N4P3 179 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 PRPF31Q8WWY3 499 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 C3orf49Q96BT1 292 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 EIF3CQ99613 913 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 NUSAP1Q9BXS6 441 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 KRT23Q9C075 422 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 BRD8Q9H0E9 1235 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 C8orf33Q9H7E9 229 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 PRDM16Q9HAZ2 1276 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 RRAGDQ9NQL2 400 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 DUSP22Q9NRW4 184 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 RASSF1Q9NS23 344 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 GKN1Q9NS71 199 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 AMFRQ9UKV5 643 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 DDX19BQ9UMR2 479 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 UBE2J1Q9Y385 318 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 TTC41PQ6P2S7 1318 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 MUC22E2RYF6 1773 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 TMEM131Q92545 1883 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 A0A087WWV3 80 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 GRID2IPA4D2P6 1211 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 M0QZQ0 153 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 CHADO15335 359 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 B4GALT5O43286 388 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 STBD1O95210 358 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 AGR2O95994 175 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 PYGLP06737 847 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 ARSAP15289 507 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 CD53P19397 219 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 MMP8P22894 467 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 SERPINA4P29622 427 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 ADRA1BP35368 520 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 GRIA3P42263 894 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 MCM2P49736 904 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 DIO1P49895 249 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 SEC24CP53992 1094 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 IRX6P78412 446 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 MRPS35P82673 323 aaKnown RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 SEMG2Q02383 582 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 TWF1Q12792 350 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 DMC1Q14565 340 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 SMAD1Q15797 465 aaKnown RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 IMMTQ16891 758 aaKnown RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 GALNTL6Q49A17 601 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 TAF1BQ53T94 588 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 ANKRD16Q6P6B7 361 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 PEG10Q86TG7 708 aaKnown RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 RALGPS2Q86X27 583 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 MINDY1Q8N5J2 469 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 PAF1Q8N7H5 531 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 HMGB4Q8WW32 186 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 NAF1Q96HR8 494 aaKnown RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 LENG8Q96PV6 779 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 THAP7Q9BT49 309 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 MECRQ9BV79 373 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 FSD1LQ9BXM9 530 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 LRRC2Q9BYS8 371 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 IL25Q9H293 177 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 EBF3Q9H4W6 596 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 PRORYQ9H606 182 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 RIC8AQ9NPQ8 531 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 LIN7CQ9NUP9 197 aaKnown RBP5.63□□□□□ -1.51
SF3B3-214ENST00000572365 MGAT4CQ9UBM8 478 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 STK39Q9UEW8 545 aa5.63□□□□□ -1.51
SF3B3-214ENST00000572365 COL5A1P20908 1838 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ARID2Q68CP9 1835 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 KIAA1549LQ6ZVL6 1849 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 DENND4CQ5VZ89 1909 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 IGLV3-22A0A075B6J6 115 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 SMCO2A6NFE2 343 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 FAM90A20PA6NIJ5 464 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 E7EVH7 732 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 H0Y626 953 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 PLK4O00444 970 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ZNF197O14709 1029 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 TLX3O43711 291 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 SLC28A2O43868 658 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 TRIM16O95361 564 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 APBB3O95704 486 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 HOXA9P31269 272 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 NAPAP54920 295 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 ROR1Q01973 937 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 CCDC173Q0VFZ6 552 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 LAMTOR4Q0VGL1 99 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 GRSF1Q12849 480 aaKnown RBP eCLIP5.62□□□□□ -1.51
SF3B3-214ENST00000572365 FOXI1Q12951 378 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 RPS6KA2Q15349 733 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 TBC1D25Q3MII6 688 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 TBRG1Q3YBR2 411 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 GLRA4Q5JXX5 417 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 DENND2CQ68D51 928 aa5.62□□□□□ -1.51
SF3B3-214ENST00000572365 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms