RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 SRCP12931 536 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 CD9P21926 228 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 CALB2P22676 271 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 PTPN4P29074 926 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 GJA4P35212 333 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 IDH3AP50213 366 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 SNRPD1P62314 119 aaKnown RBP17.24■□□□□ 0.35
RPAIN-208ENST00000571043 ELF3P78545 371 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-208ENST00000571043 SULT2A1Q06520 285 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 DGKKQ5KSL6 1271 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 MAVSQ7Z434 540 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 SLC22A9Q8IVM8 553 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 ZNF781Q8N8C0 355 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 EBF4Q9BQW3 602 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 GPR63Q9BZJ6 419 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 CCDC68Q9H2F9 335 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 SYTL2Q9HCH5 934 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 ARL8BQ9NVJ2 186 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 NCKIPSDQ9NZQ3 722 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 TRIM33Q9UPN9 1127 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 COMMD10Q9Y6G5 202 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 A0A0J9YYE9 177 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 CAPN14A8MX76 684 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 TRBC1P01850 177 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 SLC4A1P02730 911 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 CISD3P0C7P0 127 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 PRSS56P0CW18 603 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 SERPINA4P29622 427 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 RPL14P50914 215 aaKnown RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 ADARP55265 1226 aaKnown RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 XIAPP98170 497 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 PEX6Q13608 980 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 FUT11Q495W5 492 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 ARL13AQ5H913 290 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 ASTLQ6HA08 431 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 EPGNQ6UW88 154 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 KIAA0907Q7Z7F0 614 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 TTC7BQ86TV6 843 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 KIF2BQ8N4N8 673 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 NAT16Q8N8M0 369 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 TXNDC5Q8NBS9 432 aaKnown RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 CSGALNACT1Q8TDX6 532 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 PRR11Q96HE9 360 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-208ENST00000571043 CNDP1Q96KN2 507 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 KLC4Q9NSK0 619 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 TAS2R13Q9NYV9 303 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 VTI1BQ9UEU0 232 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 SLC25A13Q9UJS0 675 aa17.23■□□□□ 0.35
RPAIN-208ENST00000571043 MGRN1O60291 552 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 TULP3O75386 442 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 SRP72O76094 671 aaKnown RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 IPO13O94829 963 aaKnown RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 RHOBTB1O94844 696 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 PIGNO95427 931 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 CD1DP15813 335 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 ZNF37AP17032 561 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 TFEBP19484 476 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 CACNG1Q06432 222 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 PDAP1Q13442 181 aaKnown RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 MYLK3Q32MK0 819 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 CFAP157Q5JU67 520 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 C22orf39Q6P5X5 142 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 LYSMD3Q7Z3D4 306 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 ISCA2Q86U28 154 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 PIM3Q86V86 326 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 C12orf40Q86WS4 652 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 STK40Q8N2I9 435 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 PCDH20Q8N6Y1 951 aaKnown RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 DNASE1L2Q92874 299 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.22■□□□□ 0.354e-10■■■■■ 86.3
RPAIN-208ENST00000571043 CHFRQ96EP1 664 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 CCDC106Q9BWC9 280 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 CPEB1Q9BZB8 566 aaKnown RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 UNKQ9C0B0 810 aaKnown RBP17.22■□□□□ 0.35
RPAIN-208ENST00000571043 TNKS2Q9H2K2 1166 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 COG4Q9H9E3 785 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 SLC2A4RGQ9NR83 387 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 SLC27A6Q9Y2P4 619 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 COL4A2P08572 1712 aa17.22■□□□□ 0.35
RPAIN-208ENST00000571043 UBA6A0AVT1 1052 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 CAPN8A6NHC0 703 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 A8MT66 165 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 MATN2O00339 956 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 NARSO43776 548 aaKnown RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PYGLP06737 847 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 CHRNGP07510 517 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 KRT16P08779 473 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 SRFP11831 508 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PKMP14618 531 aaKnown RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 CTPS1P17812 591 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 FMO4P31512 558 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 OPRD1P41143 372 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 EIF2DP41214 584 aaKnown RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PTGER3P43115 390 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 CTSOP43234 321 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 SLC6A11P48066 632 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms