RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 LOC105369274A0A096LPK9 316 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 LOC102723532A0A0G2JNH3 316 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SMIM28A0A1B0GU29 152 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 USP27XA6NNY8 438 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 AGPSO00116 658 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 RTN2O75298 545 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 TACC1O75410 805 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 MLYCDO95822 493 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 PLEKP08567 350 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 H2AFZP0C0S5 128 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 FAM228BP0C875 321 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 MYBL1P10243 752 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GHRP10912 638 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 JUNBP17275 347 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 ACO1P21399 889 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GLDCP23378 1020 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 PRKCHP24723 683 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 CD52P31358 61 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 RPL9P32969 192 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 THBS4P35443 961 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GGT5P36269 586 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 USP8P40818 1118 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 PCP4P48539 62 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF132P52740 706 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 DGKQP52824 942 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 TIRAPP58753 221 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 MYL6P60660 151 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GFPT1Q06210 699 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 INCA1Q0VD86 236 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GRIK3Q13003 919 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 FHL3Q13643 280 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 LPIN1Q14693 890 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GRM7Q14831 915 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 ST3GAL2Q16842 350 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 C1QTNF12Q5T7M4 302 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF618Q5T7W0 954 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 CCDC144NLQ6NUI1 221 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SLC24A5Q71RS6 500 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 H2AFVQ71UI9 128 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 TMPRSS9Q7Z410 1059 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 UNC93AQ86WB7 457 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF761Q86XN6 746 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SYCE1Q8N0S2 351 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 OR4N4Q8N0Y3 316 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 MSANTD4Q8NCY6 345 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 CXorf38Q8TB03 319 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF483Q8TF39 744 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 U2AF1L4Q8WU68 220 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 CTNNBL1Q8WYA6 563 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SEPT8Q92599 483 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 APOBEC3GQ9HC16 384 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 KCNK9Q9NPC2 374 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 LZTFL1Q9NQ48 299 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 RXFP3Q9NSD7 469 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 CISHQ9NSE2 258 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 GDAP2Q9NXN4 497 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 HSFX1Q9UBD0 423 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 NKX1-2Q9UD57 310 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SIX4Q9UIU6 781 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 NOCTQ9UK39 431 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 NENFQ9UMX5 172 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SMG5Q9UPR3 1016 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 REXO2Q9Y3B8 237 aaKnown RBP7.26□□□□□ -1.25
CNOT1-222ENST00000570139 SNX8Q9Y5X2 465 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 HTTP42858 3142 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 NCANO14594 1321 aa7.26□□□□□ -1.25
CNOT1-222ENST00000570139 A0A1B0GTW7 788 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 SCO2A0A1W2PP80 73 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 CTAGE9A4FU28 777 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 F5H697 171 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 RFXAPO00287 272 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 PIRO00625 290 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF263O14978 683 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ERN1O75460 977 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 UBL4AP11441 157 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 PORP16435 677 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 PI3P19957 117 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 DRD1P21728 446 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 EPHA8P29322 1005 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 CASQ1P31415 396 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ARHGAP25P42331 645 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 TAF6P49848 677 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 HADHBP55084 474 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 SNX16P57768 344 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 GNG11P61952 73 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 RPS7P62081 194 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 TUBB4BP68371 445 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 MC2RQ01718 297 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 CHAF1BQ13112 559 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 THOC5Q13769 683 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 CBFBQ13951 182 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 MLANAQ16655 118 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 RBM20Q5T481 1227 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 C9orf57Q5W0N0 161 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM270Q6UE05 265 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 SLC39A5Q6ZMH5 540 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 C17orf53Q8N3J3 647 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 LSM14AQ8ND56 463 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 OR56A1Q8NGH5 318 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms