RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 KCND2Q9NZV8 630 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 SUCLA2Q9P2R7 463 aaPredicted RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 CACNG4Q9UBN1 327 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 NFU1Q9UMS0 254 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 PPIEQ9UNP9 301 aaKnown RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 AP1M2Q9Y6Q5 423 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 SYNJ2BP-COX16A0A087WUM0 186 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 KINO60870 393 aaKnown RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 KCNJ13O60928 360 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 SEC22BO75396 215 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 SEC14L2O76054 403 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 LARGE1O95461 756 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 EIF2S1P05198 315 aaKnown RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 GNLYP22749 145 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 ICAM3P32942 547 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TCF7P36402 384 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 PRPHP41219 470 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 AMTP48728 403 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 LIG4P49917 911 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 CSE1LP55060 971 aaKnown RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 TAS2R50P59544 299 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 PRAMEP78395 509 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TMEM115Q12893 351 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 AAK1Q2M2I8 961 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TMEM71Q6P5X7 295 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 OLFM4Q6UX06 510 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TUSC5Q8IXB3 177 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TBC1D21Q8IYX1 336 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 SYT2Q8N9I0 419 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 LRRC57Q8N9N7 239 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 CMASQ8NFW8 434 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 NOC3LQ8WTT2 800 aaKnown RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 PRPF31Q8WWY3 499 aaKnown RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 SMARCE1Q969G3 411 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 ELP4Q96EB1 424 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 SAT2Q96F10 170 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 FER1L6-AS2Q96M78 137 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 DACH2Q96NX9 599 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 ATP6V0BQ99437 205 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TEX13BQ9BXU2 312 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 TRIM6Q9C030 488 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 TTC12Q9H892 705 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 LTB4R2Q9NPC1 389 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHD9-220ENST00000569794 GIMAP4Q9NUV9 329 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 BEX4Q9NWD9 120 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 OCIAD1Q9NX40 245 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 MCM9Q9NXL9 1143 aa4.8□□□□□ -1.64
CHD9-220ENST00000569794 MARCH4Q9P2E8 410 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 SLC25A10Q9UBX3 287 aaPredicted RBP4.8□□□□□ -1.64
CHD9-220ENST00000569794 GLOD5A6NK44 160 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 C3orf70A6NLC5 250 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 M0QYT0 321 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 ASAP2O43150 1006 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 STX6O43752 255 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 PSMD10O75832 226 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 SOX30O94993 753 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 TPOP07202 933 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 ABCB1P08183 1280 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 TNNT1P13805 278 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 RFC1P35251 1148 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 ARL1P40616 181 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 MTHFRP42898 656 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 NUDT6P53370 316 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 ADPRHP54922 357 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 EIF3BP55884 814 aaKnown RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 FOXL2P58012 376 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 YBEYP58557 167 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 TLE3Q04726 772 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 SCN1BQ07699 218 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 GOLGA8FQ08AF8 430 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 AIMP2Q13155 320 aaKnown RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 RCN2Q14257 317 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 MORF4L2Q15014 288 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 WSCD2Q2TBF2 565 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 ARL13AQ5H913 290 aaPredicted RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 DENND1BQ6P3S1 775 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 KDELC1Q6UW63 502 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 GLRX5Q86SX6 157 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 TRABD2AQ86V40 505 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 KLBQ86Z14 1044 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 DPP10Q8N608 796 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 IPMKQ8NFU5 416 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 ARHGEF2Q92974 986 aaKnown RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 BICD1Q96G01 975 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 CD180Q99467 661 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 C1orf21Q9H246 121 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 SLC32A1Q9H598 525 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 MID1IP1Q9NPA3 183 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 IL36RNQ9UBH0 155 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 PTRH2Q9Y3E5 179 aaKnown RBP4.79□□□□□ -1.64
CHD9-220ENST00000569794 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 MMP24Q9Y5R2 645 aa4.79□□□□□ -1.64
CHD9-220ENST00000569794 LOC105369274A0A096LPK9 316 aa4.78□□□□□ -1.64
CHD9-220ENST00000569794 LOC102723532A0A0G2JNH3 316 aa4.78□□□□□ -1.64
CHD9-220ENST00000569794 FRMD3A2A2Y4 597 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms