RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SLC7A2P52569 658 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 DNAJB13P59910 316 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 CTAG1AP78358 180 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 SEMG2Q02383 582 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 STX5Q13190 355 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 RBBP5Q15291 538 aaKnown RBP8.73□□□□□ -1.01
LINC00558-201ENST00000569422 RARS2Q5T160 578 aaKnown RBP8.73□□□□□ -1.01
LINC00558-201ENST00000569422 TRAF7Q6Q0C0 670 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 PEX5LQ8IYB4 626 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 BBS5Q8N3I7 341 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 FBXO22Q8NEZ5 403 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 MDGA1Q8NFP4 955 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 DIS3LQ8TF46 1054 aaKnown RBP8.73□□□□□ -1.01
LINC00558-201ENST00000569422 LPGAT1Q92604 370 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 WBP2Q969T9 261 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 EME1Q96AY2 570 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 GPR21Q99679 349 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 SLC30A3Q99726 388 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 SCUBE2Q9NQ36 999 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 OLA1Q9NTK5 396 aaKnown RBP8.73□□□□□ -1.01
LINC00558-201ENST00000569422 TMEM161AQ9NX61 479 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 IKZF3Q9UKT9 509 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 PCDHGA7Q9Y5G6 932 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 DNAJC15Q9Y5T4 150 aa8.73□□□□□ -1.01
LINC00558-201ENST00000569422 IGLV3-10A0A075B6K4 115 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 NPEPPSL1A6NEC2 478 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ACSL4O60488 711 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CLASP2O75122 1294 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CDK14O94921 469 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 FGF1P05230 155 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ALDOCP09972 364 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF37AP17032 561 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CTPS1P17812 591 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 PRDX3P30048 256 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CORO1AP31146 461 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 GPR17Q13304 367 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 PLD1Q13393 1074 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TLR1Q15399 786 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 FUT11Q495W5 492 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 FAM26DQ5JW98 314 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 RNF219Q5W0B1 726 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CCDC117Q8IWD4 279 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SIDT2Q8NBJ9 832 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 FAM110BQ8TC76 370 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 LRTOMTQ8WZ04 291 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 NR1H4Q96RI1 486 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SERINC2Q96SA4 455 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ACOX2Q99424 681 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TTPALQ9BTX7 342 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TM6SF2Q9BZW4 377 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 EPS15L1Q9UBC2 864 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 FKBPLQ9UIM3 349 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 AURKCQ9UQB9 309 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 OR6C75A6NL08 312 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 DRGXA6NNA5 263 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 LILRB3O75022 631 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SNUPNO95149 360 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 KLKB1P03952 638 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SPATA31D3P0C874 917 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 HGFP14210 728 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 HLA-DPA1P20036 260 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 HOXD9P28356 352 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 MAGEA10P43363 369 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SLC11A2P49281 568 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 HERVK_113P63132 956 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TIAL1Q01085 375 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 NRG1Q02297 640 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF177Q13360 481 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 GSTA3Q16772 222 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TCTN1Q2MV58 587 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 PSAPL1Q6NUJ1 521 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 C16orf54Q6UWD8 224 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CYHR1Q6ZMK1 362 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 SPATA31D4Q6ZUB0 917 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 PIANPQ8IYJ0 282 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ST13P4Q8IZP2 240 aaPredicted RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 PELI3Q8N2H9 469 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 FBXO39Q8N4B4 442 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CARNMT1Q8N4J0 409 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TEX26Q8N6G2 289 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 TWIST2Q8WVJ9 160 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 MAELQ96JY0 434 aaKnown RBP8.72□□□□□ -1.01
LINC00558-201ENST00000569422 CASD1Q96PB1 797 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 C1orf50Q9BV19 199 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 ERVK-6Q9BXR3 956 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 MEAF6Q9HAF1 191 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 PLK2Q9NYY3 685 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 V9GYQ6 96 aa8.72□□□□□ -1.01
LINC00558-201ENST00000569422 A0A0J9YYE9 177 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 C2orf78A6NCI8 922 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF839A8K0R7 811 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 TRIM38O00635 465 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 COCHO43405 550 aa8.71□□□□□ -1.01
LINC00558-201ENST00000569422 NRP2O60462 931 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms