RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	JMJD7	P0C870	316 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	RBP3	P10745	1247 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	VCL	P18206	1134 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	NFKB1	P19838	968 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	AK4	P27144	223 aa	Predicted RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ALDH4A1	P30038	563 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	GPR3	P46089	330 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	MARCKSL1	P49006	195 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	INHBC	P55103	352 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	WNT3A	P56704	352 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PCBP4	P57723	403 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	DCDC1	P59894	354 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ERVPABLB-1	P60509	514 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CCL7	P80098	99 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	OTUD4	Q01804	1114 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	NOMO1	Q15155	1222 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	TBC1D25	Q3MII6	688 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	MAP9	Q49MG5	647 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PYCR3	Q53H96	274 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	HENMT1	Q5T8I9	393 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ALS2CL	Q60I27	953 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	GLT6D1	Q7Z4J2	308 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	TMC3	Q7Z5M5	1100 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PHYKPL	Q8IUZ5	450 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ZNF567	Q8N184	647 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PELI3	Q8N2H9	469 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC25A41	Q8N5S1	370 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	RNF10	Q8N5U6	811 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	TRAM1L1	Q8N609	369 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ZNF248	Q8NDW4	579 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CCDC112	Q8NEF3	446 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	IPMK	Q8NFU5	416 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CCL4L1	Q8NHW4	92 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ACTL9	Q8TC94	416 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	BRSK1	Q8TDC3	778 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	BLOC1S5	Q8TDH9	187 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	TMEM159	Q96B96	161 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	SH3KBP1	Q96B97	665 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ATXN7L3B	Q96GX2	97 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PLEKHG4B	Q96PX9	1271 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CMKLR1	Q99788	373 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CARD9	Q9H257	536 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	EPB41L5	Q9HCM4	733 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	TRIM39	Q9HCM9	518 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	LHX6	Q9UPM6	363 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	SATB2	Q9UPW6	733 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PCDHB1	Q9Y5F3	818 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CEP295	Q9C0D2	2601 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	KIF26B	Q2KJY2	2108 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	RCCD1	A6NED2	376 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	OR5K4	A6NMS3	321 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	C2orf81	A6NN90	581 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	KCNN4	O15554	427 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	GRID2	O43424	1007 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	NOBOX	O60393	691 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	ECEL1	O95672	775 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	CAPNS1	P04632	268 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	FGF1	P05230	155 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	RBL1	P28749	1068 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	PTPN7	P35236	360 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	HMGCL	P35914	325 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	EIF2S3	P41091	472 aa	Known RBP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	MLLT3	P42568	568 aa	Predicted RBP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	PDE1B	Q01064	536 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	WASHC5	Q12768	1159 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	ITGA9	Q13797	1035 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	CLPP	Q16740	277 aa	Predicted RBP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	AMZ1	Q400G9	498 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	SEL1L2	Q5TEA6	688 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	TMEM164	Q5U3C3	297 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	C19orf48	Q6RUI8	117 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	RFLNA	Q6ZTI6	216 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	RAB11FIP2	Q7L804	512 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC9B2	Q86UD5	537 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	TRIM74	Q86UV6	250 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	FBXO39	Q8N4B4	442 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	SCARF2	Q96GP6	870 aa	Predicted RBP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	COX14	Q96I36	57 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	ALS2CR12	Q96Q35	445 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	SMIM14	Q96QK8	99 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	TRIB3	Q96RU7	358 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	AGAP2	Q99490	1192 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC38A3	Q99624	504 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	DPYSL5	Q9BPU6	564 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	LACRT	Q9GZZ8	138 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	WDR70	Q9NW82	654 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	PCDHGA8	Q9Y5G5	932 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	ENTPD2	Q9Y5L3	495 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782	RNF215	Q9Y6U7	377 aa		10.28	□□□□□ -0.76
UBR1-207	ENST00000568782		A0A087WV48	116 aa		10.27	□□□□□ -0.77
UBR1-207	ENST00000568782	LOC285095	A0A1B0GVY8	99 aa		10.27	□□□□□ -0.77
UBR1-207	ENST00000568782	GRID2IP	A4D2P6	1211 aa		10.27	□□□□□ -0.77
UBR1-207	ENST00000568782		D6RAR5	112 aa		10.27	□□□□□ -0.77
UBR1-207	ENST00000568782		F5H423	210 aa	Predicted RBP	10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms