RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RIPOR3Q96MK2 946 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 SIKE1Q9BRV8 207 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ZNF670Q9BS34 389 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PHF7Q9BWX1 381 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 GCOM2Q9BZD3 368 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ZNF768Q9H5H4 540 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 SAR1AQ9NR31 198 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 FGFR1OP2Q9NVK5 253 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MKS1Q9NXB0 559 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 RCOR3Q9P2K3 495 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 HS3ST4Q9Y661 456 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CEP250Q9BV73 2442 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MYH11P35749 1972 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 SCN10AQ9Y5Y9 1956 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ZFHX4Q86UP3 3567 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 RALGAPA2Q2PPJ7 1873 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 BCLAF3A2AJT9 711 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 C3orf70A6NLC5 250 aaPredicted RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 C2CD4BA6NLJ0 364 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 M0QYV0 167 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TRAFD1O14545 582 aaPredicted RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 KLF11O14901 512 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TYROBPO43914 113 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 EDF1O60869 148 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 GPR32O75388 356 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 C22orf31O95567 290 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ATP6V1G2O95670 118 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ABHD16AO95870 558 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TRUB2O95900 331 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 GH1P01241 217 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 LMNAP02545 664 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 INHBAP08476 426 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 STAG3L1P0CL83 205 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SRGAP2BP0DMP2 458 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 RAP2AP10114 183 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TXNP10599 105 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 KRT10P13645 584 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 NQO1P15559 274 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ZFP36P26651 326 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 MIPP30301 263 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SDC4P31431 198 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 RFC1P35251 1148 aaPredicted RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 PNPLA4P41247 253 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TNFSF9P41273 254 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 GPD2P43304 727 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SLC6A9P48067 706 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 NDUFV1P49821 464 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SERPINB9P50453 376 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 EIF3EP60228 445 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ELF3P78545 371 aaPredicted RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 DEFB103AP81534 67 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 CDK16Q00536 496 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 OGDHQ02218 1023 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 CNTN2Q02246 1040 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 NAB1Q13506 487 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 KRT81Q14533 505 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TMEM132DQ14C87 1099 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TIGD2Q4W5G0 525 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 FAM102AQ5T9C2 384 aaPredicted RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ZNF449Q6P9G9 518 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 CHSY1Q86X52 802 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 LDLRAD3Q86YD5 345 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 RFX6Q8HWS3 928 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 LRRC52Q8N7C0 313 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 PPTC7Q8NI37 304 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SPATA18Q8TC71 538 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 PROKR1Q8TCW9 393 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 MGARPQ8TDB4 240 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 TFAP2BQ92481 460 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 CPT1BQ92523 772 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 HPDLQ96IR7 371 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 RSRC1Q96IZ7 334 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 MSLNLQ96KJ4 702 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 NLRP4Q96MN2 994 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SLC2A13Q96QE2 648 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 YME1L1Q96TA2 773 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 HERPUD2Q9BSE4 406 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 C17orf80Q9BSJ5 609 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 NAT9Q9BTE0 207 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 MRI1Q9BV20 369 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 IQCGQ9H095 443 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 LRMDAQ9H2I8 198 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 FAM96AQ9H5X1 160 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ECT2Q9H8V3 914 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 XAB2Q9HCS7 855 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 PNPLA8Q9NP80 782 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ARHGEF3Q9NR81 526 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 FAM30AQ9NZY2 134 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 HESX1Q9UBX0 185 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 PHTF1Q9UMS5 762 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 MTO1Q9Y2Z2 717 aaKnown RBP5.37□□□□□ -1.55
CAPN3-217ENST00000567817 ARID2Q68CP9 1835 aa5.37□□□□□ -1.55
CAPN3-217ENST00000567817 SCN5AQ14524 2016 aa5.36□□□□□ -1.55
CAPN3-217ENST00000567817 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-217ENST00000567817 RRN3P2A6NIE6 340 aa5.36□□□□□ -1.55
CAPN3-217ENST00000567817 DRGXA6NNA5 263 aa5.36□□□□□ -1.55
CAPN3-217ENST00000567817 HACD1B0YJ81 288 aa5.36□□□□□ -1.55
CAPN3-217ENST00000567817 POC1B-GALNT4F8VUJ3 575 aa5.36□□□□□ -1.55
CAPN3-217ENST00000567817 GOLGA8SH3BPF8 625 aa5.36□□□□□ -1.55
CAPN3-217ENST00000567817 APOL1O14791 398 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms