RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GALNT3Q14435 633 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 SLC14A2Q15849 920 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 TAF1BQ53T94 588 aaPredicted RBP20.01■□□□□ 0.79
CLN6-207ENST00000566347 USP53Q70EK8 1073 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 BZW1Q7L1Q6 419 aaKnown RBP20.01■□□□□ 0.79
CLN6-207ENST00000566347 RNF25Q96BH1 459 aaPredicted RBP20.01■□□□□ 0.79
CLN6-207ENST00000566347 AGAP3Q96P47 875 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 WDR24Q96S15 920 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 NUDT22Q9BRQ3 303 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 B3GNT4Q9C0J1 378 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 ZFYVE1Q9HBF4 777 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 RAD18Q9NS91 495 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 SEPT10Q9P0V9 454 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 CNOT6Q9ULM6 557 aaKnown RBP20.01■□□□□ 0.79
CLN6-207ENST00000566347 PPM1DO15297 605 aa20■□□□□ 0.79
CLN6-207ENST00000566347 DNAJC6O75061 913 aa20■□□□□ 0.79
CLN6-207ENST00000566347 PRB1P04280 392 aa20■□□□□ 0.79
CLN6-207ENST00000566347 ATP1A1P05023 1023 aaKnown RBP20■□□□□ 0.79
CLN6-207ENST00000566347 LIPCP11150 499 aa20■□□□□ 0.79
CLN6-207ENST00000566347 ITIH1P19827 911 aa20■□□□□ 0.79
CLN6-207ENST00000566347 COMTP21964 271 aa20■□□□□ 0.79
CLN6-207ENST00000566347 NR2C2P49116 596 aa20■□□□□ 0.79
CLN6-207ENST00000566347 DYNLT1P63172 113 aa20■□□□□ 0.79
CLN6-207ENST00000566347 GPLD1P80108 840 aa20■□□□□ 0.79
CLN6-207ENST00000566347 TBX2Q13207 712 aaPredicted RBP20■□□□□ 0.79
CLN6-207ENST00000566347 TRA2AQ13595 282 aaKnown RBP eCLIP20■□□□□ 0.79
CLN6-207ENST00000566347 TFDP2Q14188 446 aa20■□□□□ 0.79
CLN6-207ENST00000566347 TMEM164Q5U3C3 297 aa20■□□□□ 0.79
CLN6-207ENST00000566347 PCSK4Q6UW60 755 aa20■□□□□ 0.79
CLN6-207ENST00000566347 NPNTQ6UXI9 565 aa20■□□□□ 0.79
CLN6-207ENST00000566347 LYSMD3Q7Z3D4 306 aa20■□□□□ 0.79
CLN6-207ENST00000566347 OR4D9Q8NGE8 314 aa20■□□□□ 0.79
CLN6-207ENST00000566347 TRIB3Q96RU7 358 aa20■□□□□ 0.79
CLN6-207ENST00000566347 CEP41Q9BYV8 373 aa20■□□□□ 0.79
CLN6-207ENST00000566347 MAGEE1Q9HCI5 957 aa20■□□□□ 0.79
CLN6-207ENST00000566347 KCNK4Q9NYG8 393 aa20■□□□□ 0.79
CLN6-207ENST00000566347 OAS3Q9Y6K5 1087 aaKnown RBP20■□□□□ 0.79
CLN6-207ENST00000566347 IGHV1OR21-1A0A087WYE8 117 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 PRAMEF33A0A0G2JMD5 474 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 IGHV5-10-1A0A0J9YXX1 117 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 FADS2P1A8MWK0 482 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 PRAMEF10O60809 474 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 TNNT1P13805 278 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 CD82P27701 267 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 LIMK2P53671 638 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 MAPK10P53779 464 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 DCDC1P59894 354 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 CDK18Q07002 472 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 C16orf72Q14CZ0 275 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 TEX44Q53QW1 395 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 CCDC70Q6NSX1 233 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 MFSD7Q6UXD7 560 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 ZNF574Q6ZN55 896 aaPredicted RBP19.99■□□□□ 0.79
CLN6-207ENST00000566347 CHST15Q7LFX5 561 aaPredicted RBP19.99■□□□□ 0.79
CLN6-207ENST00000566347 SFRP1Q8N474 314 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 SLC37A2Q8TED4 501 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 USP7Q93009 1102 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 TADA1Q96BN2 335 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 SRPK1Q96SB4 655 aaKnown RBP19.99■□□□□ 0.79
CLN6-207ENST00000566347 ZSCAN5AQ9BUG6 496 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 WDR70Q9NW82 654 aa19.99■□□□□ 0.79
CLN6-207ENST00000566347 GCN1Q92616 2671 aaKnown RBP19.99■□□□□ 0.79
CLN6-207ENST00000566347 AGRPO00253 132 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 PSTPIP1O43586 416 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 C1QL1O75973 258 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 SLC2A4P14672 509 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 ETV5P41161 510 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 CDKN2BP42772 138 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 HADHBP55084 474 aaKnown RBP19.98■□□□□ 0.79
CLN6-207ENST00000566347 PCSK7Q16549 785 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 TAZQ16635 292 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 ZNF569Q5MCW4 686 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 PDPK2PQ6A1A2 396 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 CCDC74BQ96LY2 380 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 SLC38A3Q99624 504 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 SPATA16Q9BXB7 569 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 CARD9Q9H257 536 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 STN1Q9H668 368 aaKnown RBP19.98■□□□□ 0.79
CLN6-207ENST00000566347 GLOD4Q9HC38 313 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 NFKBIL1Q9UBC1 381 aaPredicted RBP19.98■□□□□ 0.79
CLN6-207ENST00000566347 HYOU1Q9Y4L1 999 aa19.98■□□□□ 0.79
CLN6-207ENST00000566347 A0A0A6YYK5 440 aaPredicted RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 GPR89AB7ZAQ6 455 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 NUAK1O60285 661 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 GPR89BP0CG08 455 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 NOP2P46087 812 aaKnown RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 CFHR1Q03591 330 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 PRKD1Q15139 912 aaPredicted RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 NKAIN2Q5VXU1 208 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 SARM1Q6SZW1 724 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 KDELC2Q7Z4H8 507 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 RCBTB1Q8NDN9 531 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 CCDC112Q8NEF3 446 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 OR10G6Q8NH81 332 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 TFB1MQ8WVM0 346 aaKnown RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 TTC9Q92623 222 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 EID2BQ96D98 161 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 AHCYL2Q96HN2 611 aaKnown RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 TEKT5Q96M29 485 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 HERPUD2Q9BSE4 406 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms