RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 USP7Q93009 1102 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 RBM41Q96IZ5 413 aaKnown RBP18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PDLIM2Q96JY6 352 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 MCCC1Q96RQ3 725 aaPredicted RBP18.84■□□□□ 0.61
SPSB3-207ENST00000565550 FAM118BQ9BPY3 351 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PPP2R2CQ9Y2T4 447 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PPIL1Q9Y3C6 166 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 ST14Q9Y5Y6 855 aa18.84■□□□□ 0.61
SPSB3-207ENST00000565550 PRAMEF33A0A0G2JMD5 474 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 CCDC66A2RUB6 948 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 RHPN2P1A8MT19 583 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 MATN3O15232 486 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 KRT86O43790 486 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 PRAMEF10O60809 474 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 CPNE6O95741 557 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 PDHA1P08559 390 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 CCNCP24863 283 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 MAPK10P53779 464 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 CTBSQ01459 385 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 DSC2Q02487 901 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 PPIDQ08752 370 aaKnown RBP18.83■□□□□ 0.6
SPSB3-207ENST00000565550 ITKQ08881 620 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 AP1B1Q10567 949 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 GSE1Q14687 1217 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 MAP9Q49MG5 647 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 SLC30A9Q6PML9 568 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 RFLNAQ6ZTI6 216 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 USP45Q70EL2 814 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 ZNF438Q7Z4V0 828 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 TECPR1Q7Z6L1 1165 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 PIM3Q86V86 326 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 TEX26Q8N6G2 289 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 PATE1Q8WXA2 126 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 MED8Q96G25 268 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 CALR3Q96L12 384 aaKnown RBP18.83■□□□□ 0.6
SPSB3-207ENST00000565550 TSGA13Q96PP4 275 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 SMIM14Q96QK8 99 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 SEMA3CQ99985 751 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 TSGA10Q9BZW7 698 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 C10orf88Q9H8K7 445 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPSB3-207ENST00000565550 CD84Q9UIB8 345 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 SLC17A4Q9Y2C5 497 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 TTLL3Q9Y4R7 772 aa18.83■□□□□ 0.6
SPSB3-207ENST00000565550 ZNF462Q96JM2 2506 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 B8ZZF3 427 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 LIPCP11150 499 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 TEAD1P28347 426 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 ADCY8P40145 1251 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 GPR1P46091 355 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 RWDD2BP57060 319 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 DPTQ07507 201 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 C16orf72Q14CZ0 275 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 DOK6Q6PKX4 331 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 ZNF574Q6ZN55 896 aaPredicted RBP18.82■□□□□ 0.6
SPSB3-207ENST00000565550 ZC3H18Q86VM9 953 aaKnown RBP18.82■□□□□ 0.6
SPSB3-207ENST00000565550 ZFAND4Q86XD8 727 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 LRRC49Q8IUZ0 686 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 ABCG8Q9H221 673 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 FOXJ2Q9P0K8 574 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 SEPT10Q9P0V9 454 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 TMEM98Q9Y2Y6 226 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 PLEKHM1Q9Y4G2 1056 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 AHCTF1Q8WYP5 2266 aa18.82■□□□□ 0.6
SPSB3-207ENST00000565550 ARHGEF17Q96PE2 2063 aaPredicted RBP18.81■□□□□ 0.6
SPSB3-207ENST00000565550 C9orf172C9J069 976 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 J3QKU1 62 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 FZD6O60353 706 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 JCHAINP01591 159 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
SPSB3-207ENST00000565550 IVLP07476 585 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 ZFXP17010 805 aaPredicted RBP18.81■□□□□ 0.6
SPSB3-207ENST00000565550 MX2P20592 715 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 CD1CP29017 333 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 PTSQ03393 145 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 NIPAL4Q0D2K0 466 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 BIRC2Q13490 618 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 TFDP2Q14188 446 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 NR1D2Q14995 579 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 PPP2R5EQ16537 467 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 LRRC66Q68CR7 880 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 TIGD7Q6NT04 549 aaPredicted RBP18.81■□□□□ 0.6
SPSB3-207ENST00000565550 SYCE1Q8N0S2 351 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 NAGSQ8N159 534 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 NDUFAF2Q8N183 169 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 RNF10Q8N5U6 811 aaKnown RBP18.81■□□□□ 0.6
SPSB3-207ENST00000565550 CNTD1Q8N815 330 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 SCAMP4Q969E2 229 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 AP2M1Q96CW1 435 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 HES6Q96HZ4 224 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 NUDT22Q9BRQ3 303 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 OSBPL8Q9BZF1 889 aa18.81■□□□□ 0.6
SPSB3-207ENST00000565550 PPM1DO15297 605 aa18.8■□□□□ 0.6
SPSB3-207ENST00000565550 SOD1P00441 154 aa18.8■□□□□ 0.6
SPSB3-207ENST00000565550 CCL4P13236 92 aa18.8■□□□□ 0.6
SPSB3-207ENST00000565550 PDK1Q15118 436 aa18.8■□□□□ 0.6
SPSB3-207ENST00000565550 BBS12Q6ZW61 710 aa18.8■□□□□ 0.6
SPSB3-207ENST00000565550 SGF29Q96ES7 293 aa18.8■□□□□ 0.6
SPSB3-207ENST00000565550 SCARF2Q96GP6 870 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms