RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ADAMTS16Q8TE57 1224 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 CHPT1Q8WUD6 406 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 SLX1AQ9BQ83 275 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 ASPSCR1Q9BZE9 553 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 ZBTB26Q9HCK0 441 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 ATAD3AQ9NVI7 634 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 SPATA7Q9P0W8 599 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 TSC22D4Q9Y3Q8 395 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 ARL5AQ9Y689 179 aa10.42□□□□□ -0.74
RNF40-204ENST00000563683 CLOCKO15516 846 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 CNTN5O94779 1100 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 PARNO95453 639 aaKnown RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 FGF1P05230 155 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 TFPTP0C1Z6 253 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 HLA-DPA1P20036 260 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MLLT6P55198 1093 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 LDLRAD1Q5T700 205 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MRPS31Q92665 395 aaKnown RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 KIF17Q9P2E2 1029 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MTF2Q9Y483 593 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 HS3ST4Q9Y661 456 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 UBR3Q6ZT12 1888 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 GOT2P00505 430 aaKnown RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 MT-ND1P03886 318 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ZNF7P17097 686 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 HCAR3P49019 387 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MAPK10P53779 464 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 CDH15P55291 814 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ATP1A4Q13733 1029 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ANKDD1AQ495B1 522 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 TIGD2Q4W5G0 525 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 CACHD1Q5VU97 1274 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 RETSATQ6NUM9 610 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MAMDC4Q6UXC1 1216 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 STK32CQ86UX6 486 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 HERC6Q8IVU3 1022 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MAGEE2Q8TD90 523 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 KCNN1Q92952 543 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 C19orf60Q96EN9 201 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 GPR22Q99680 433 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ABCG8Q9H221 673 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ASB8Q9H765 288 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ZFP14Q9HCL3 533 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 SCHIP1Q9P0W5 487 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 AGO1Q9UL18 857 aaKnown RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 GPC6Q9Y625 555 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 A0A0U1RQF3 1178 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 FAM149AA5PLN7 773 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 SEC22BO75396 215 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 PCNAP12004 261 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 UGT1A6P19224 532 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 LPOP22079 712 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 UGT1A1P22309 533 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 UGT1A4P22310 534 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 UGT1A3P35503 534 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 UGT1A5P35504 534 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 PIK3CGP48736 1102 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 EIF2B2P49770 351 aaKnown RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 FBXL22Q6P050 247 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 KIAA0408Q6ZU52 694 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 PIM3Q86V86 326 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 CAMK1DQ8IU85 385 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ZNF555Q8NEP9 628 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 CENPIQ92674 756 aaPredicted RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 GPR21Q99679 349 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 SLC39A3Q9BRY0 314 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 OSBPL2Q9H1P3 480 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 TRNAU1APQ9NX07 287 aaKnown RBP10.41□□□□□ -0.74
RNF40-204ENST00000563683 TMEM9Q9P0T7 183 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 MOSPD1Q9UJG1 213 aa10.41□□□□□ -0.74
RNF40-204ENST00000563683 ZNF487B1APH4 448 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 KPNA4O00629 521 aaPredicted RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 MYO1DO94832 1006 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 MC4RP32245 332 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 SMAD3P84022 425 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 CRHR2Q13324 411 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 BOP1Q14137 746 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 PGS1Q32NB8 556 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 ARMC12Q5T9G4 340 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 KIAA0930Q6ICG6 404 aaPredicted RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 PPP4R4Q6NUP7 873 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 ATG14Q6ZNE5 492 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 DDX53Q86TM3 631 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 TMEM135Q86UB9 458 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 ARNTL2Q8WYA1 636 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
RNF40-204ENST00000563683 LINGO1Q96FE5 620 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 OLFM1Q99784 485 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 UNC93B1Q9H1C4 597 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 KLQ9UEF7 1012 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 POLG2Q9UHN1 485 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 FAM32AQ9Y421 112 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 MYO9BQ13459 2157 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 TRIM64CA6NLI5 447 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 K7EPI3 171 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 ZNF197O14709 1029 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 SEPT4O43236 478 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 CNOT3O75175 753 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 RPS24P62847 133 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms