RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 KELP23276 732 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 FDFT1P37268 417 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 GRIA1P42261 906 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 ACADVLP49748 655 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 BLKP51451 505 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 ZNF140P52738 457 aaPredicted RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 SEMA5AQ13591 1074 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 TCEA2Q15560 299 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 TAF1AQ15573 450 aaPredicted RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 DEFB133Q30KQ1 61 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 INAVAQ3KP66 663 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 KHDC1Q4VXA5 237 aaKnown RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 ZNF648Q5T619 568 aaPredicted RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 DOK6Q6PKX4 331 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 GLT6D1Q7Z4J2 308 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 SFTPA2Q8IWL1 248 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 FSTL5Q8N475 847 aaPredicted RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 TRAM1L1Q8N609 369 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 FAM181AQ8N9Y4 354 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 ATL2Q8NHH9 583 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 DTX3LQ8TDB6 740 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 BRSK1Q8TDC3 778 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 GPBAR1Q8TDU6 330 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 APOLD1Q96LR9 279 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 CNTNAP3BQ96NU0 1288 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 PLEKHG4BQ96PX9 1271 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 BOCQ9BWV1 1114 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 SPATA16Q9BXB7 569 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 CNTNAP3Q9BZ76 1288 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 CDH19Q9H159 772 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 LRRC40Q9H9A6 602 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 CYP4F12Q9HCS2 524 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 RAD18Q9NS91 495 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 HOMER3Q9NSC5 361 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 PIH1D1Q9NWS0 290 aaKnown RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 FTSJ1Q9UET6 329 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 TDRD6O60522 2096 aaKnown RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 NEMP2A6NFY4 417 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ERI2A8K979 691 aaKnown RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 GPR39O43194 453 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 PSMD3O43242 534 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A9O60656 530 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 CKMT1AP12532 417 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 CKMT2P17540 419 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A6P19224 532 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 LPOP22079 712 aaPredicted RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A1P22309 533 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A4P22310 534 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ACP1P24666 158 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 PSMA3P25788 255 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A3P35503 534 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A5P35504 534 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 COILP38432 576 aaPredicted RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 ADCY8P40145 1251 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 GNPDA1P46926 289 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 XIAPP98170 497 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ELOCQ15369 112 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 CHRNA6Q15825 494 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ATP13A5Q4VNC0 1218 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 PYCR3Q53H96 274 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 C6orf132Q5T0Z8 1188 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 PDPK2PQ6A1A2 396 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 LVRNQ6Q4G3 990 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 ADGRG6Q86SQ4 1221 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 SLC35F3Q8IY50 421 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 CCDC89Q8N998 374 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 OR4K2Q8NGD2 314 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 OR52K1Q8NGK4 314 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 OR13C4Q8NGS5 318 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 GLYATL1Q969I3 302 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 VPS35Q96QK1 796 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ZSCAN5AQ9BUG6 496 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 CARS2Q9HA77 564 aaKnown RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A7Q9HAW7 530 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A10Q9HAW8 530 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 UGT1A8Q9HAW9 530 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ARFGAP3Q9NP61 516 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 CASS4Q9NQ75 786 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 RAB6BQ9NRW1 208 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 TRNAU1APQ9NX07 287 aaKnown RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBR1-204ENST00000563239 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 VPS18Q9P253 973 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 PAK5Q9P286 719 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 ATXN10Q9UBB4 475 aa8.47□□□□□ -1.05
UBR1-204ENST00000563239 FEZ2Q9UHY8 353 aaPredicted RBP8.47□□□□□ -1.05
UBR1-204ENST00000563239 MYLKQ15746 1914 aa8.46□□□□□ -1.05
UBR1-204ENST00000563239 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.05
UBR1-204ENST00000563239 FLNBO75369 2602 aaKnown RBP8.46□□□□□ -1.05
UBR1-204ENST00000563239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 GLYATL1P3A0A0U1RQE8 302 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 TCRBV7S3A2A0A539 114 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 MROH6A6NGR9 719 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 AGAP14A8MT82 685 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 CCL22O00626 93 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 CHUKO15111 745 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 CASC3O15234 703 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms