RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SORBS2O94875 1100 aaKnown RBP19■□□□□ 0.63
SMPD3-203ENST00000563226 IGSF6O95976 241 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 PENKP01210 267 aaPredicted RBP19■□□□□ 0.63
SMPD3-203ENST00000563226 CYBBP04839 570 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 RHOP08100 348 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 EPCAMP16422 314 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 GNAZP19086 355 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 CSNK1DP48730 415 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 ERFP50548 548 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 RAD51Q06609 339 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 GALNT1Q10472 559 aaPredicted RBP19■□□□□ 0.63
SMPD3-203ENST00000563226 CDKN3Q16667 212 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 SNX32Q86XE0 403 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 CD200R1Q8TD46 325 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 TMEM106CQ9BVX2 250 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 LZTS1Q9Y250 596 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 VPS9D1Q9Y2B5 631 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 HCFC2Q9Y5Z7 792 aa19■□□□□ 0.63
SMPD3-203ENST00000563226 COPG1Q9Y678 874 aaKnown RBP19■□□□□ 0.63
SMPD3-203ENST00000563226 CHD9Q3L8U1 2897 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 SUPT3HB4E1H0 165 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 BNIP3LO60238 219 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 VPS26AO75436 327 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 SUPT3HO75486 399 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 ECI2O75521 394 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 CLDN7O95471 211 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 PFKLP17858 780 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 LBX1P52954 281 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 CACNG1Q06432 222 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 CYHR1Q6ZMK1 362 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 RIPOR1Q6ZS17 1223 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 PAF1Q8N7H5 531 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 OR2AP1Q8NGE2 309 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 TACO1Q9BSH4 297 aaKnown RBP18.99■□□□□ 0.63
SMPD3-203ENST00000563226 P2RY12Q9H244 342 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 ATP13A3Q9H7F0 1226 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 MEAF6Q9HAF1 191 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 ZFYVE1Q9HBF4 777 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 RNF112Q9ULX5 631 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 TRAF6Q9Y4K3 522 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 SLC30A1Q9Y6M5 507 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 PRRC2BQ5JSZ5 2229 aaKnown RBP18.99■□□□□ 0.63
SMPD3-203ENST00000563226 CDH23Q9H251 3354 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 NEDD8-MDP1E9PL57 170 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 SOCS5O75159 536 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 GFAPP14136 432 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 EZRP15311 586 aaKnown RBP18.99■□□□□ 0.63
SMPD3-203ENST00000563226 SH3BP2P78314 561 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 CAMK1Q14012 370 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 PPP1R3AQ16821 1122 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 AARS2Q5JTZ9 985 aaKnown RBP18.99■□□□□ 0.63
SMPD3-203ENST00000563226 TSPAN33Q86UF1 283 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 CPNE9Q8IYJ1 553 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 EFCAB3Q8N7B9 438 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 MICAL1Q8TDZ2 1067 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 EEF1AKMT1Q8WVE0 214 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 MYLIPQ8WY64 445 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 TRMOQ9BU70 441 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 LINC00597Q9H2U6 94 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 DCLRE1BQ9H816 532 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 SARS2Q9NP81 518 aaKnown RBP18.99■□□□□ 0.63
SMPD3-203ENST00000563226 PRKAG2Q9UGJ0 569 aa18.99■□□□□ 0.63
SMPD3-203ENST00000563226 TRMT6Q9UJA5 497 aaKnown RBP18.99■□□□□ 0.63
SMPD3-203ENST00000563226 BTN3A1O00481 513 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 PRAMEF1O95521 474 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 PYGLP06737 847 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 PTPN2P17706 415 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 PTGER3P43115 390 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 RPL26P61254 145 aaKnown RBP18.98■□□□□ 0.63
SMPD3-203ENST00000563226 RCN1Q15293 331 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 C22orf39Q6P5X5 142 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 NET1Q7Z628 596 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-203ENST00000563226 DEFB107AQ8IZN7 70 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 PELI3Q8N2H9 469 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 STAG3L4Q8TBR4 150 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 FUBP1Q96AE4 644 aaKnown RBP18.98■□□□□ 0.63
SMPD3-203ENST00000563226 FAR2Q96K12 515 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 RTKNQ9BST9 563 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 BOCQ9BWV1 1114 aa18.98■□□□□ 0.63
SMPD3-203ENST00000563226 LINC01553A4QN01 128 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 CAPN8A6NHC0 703 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 PFDN6O15212 129 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 PDE5AO76074 875 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 CDK14O94921 469 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 PSMG1O95456 288 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 EN2P19622 333 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 CHRM3P20309 590 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 MAPK8P45983 427 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 ATP6V0D1P61421 351 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 SATB1Q01826 763 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 UBE2Q1Q7Z7E8 422 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 CEP70Q8NHQ1 597 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 KCNJ9Q92806 393 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 LINGO1Q96FE5 620 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 ZSWIM3Q96MP5 696 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 BBS2Q9BXC9 721 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 TDP1Q9NUW8 608 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 HS3ST2Q9Y278 367 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 A0A1B0GTL3 188 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms