RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 XPR1Q9UBH6 696 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 FAM50BQ9Y247 325 aa17.94■□□□□ 0.46
COMMD4-208ENST00000563220 KPNA3O00505 521 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-208ENST00000563220 PRNPP04156 253 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 APODP05090 189 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 APOA4P06727 396 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 RALBP11234 206 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 CYP2A6P11509 494 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-208ENST00000563220 ITGALP20701 1170 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 SPINT3P49223 89 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 RGS19P49795 217 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 ADARP55265 1226 aaKnown RBP17.93■□□□□ 0.46
COMMD4-208ENST00000563220 OCRLQ01968 901 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 ITGA9Q13797 1035 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 ARHGEF7Q14155 803 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 FAM83EQ2M2I3 478 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 AAK1Q2M2I8 961 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 C6orf89Q6UWU4 347 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 ATG14Q6ZNE5 492 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 TMIEQ8NEW7 156 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 OR8D1Q8WZ84 308 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.93■□□□□ 0.46
COMMD4-208ENST00000563220 ERLEC1Q96DZ1 483 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 BOCQ9BWV1 1114 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 CACNA2D2Q9NY47 1150 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 COLQQ9Y215 455 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-208ENST00000563220 BRWD1Q9NSI6 2320 aa17.93■□□□□ 0.46
COMMD4-208ENST00000563220 GRXCR2A6NFK2 248 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 AGAP14A8MT82 685 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ITM2AO43736 263 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 KIAA0754O94854 1291 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 IL1BP01584 269 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ZNF30P17039 623 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 SLC26A3P40879 764 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 RALGDSQ12967 914 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ELAVL3Q14576 367 aaKnown RBP17.92■□□□□ 0.46
COMMD4-208ENST00000563220 AGAP9Q5VTM2 703 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ZYG11AQ6WRX3 759 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 HSD11B1LQ7Z5J1 315 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 CCDC91Q7Z6B0 441 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 PPP1R14CQ8TAE6 165 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 PIP4K2CQ8TBX8 421 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 NAT14Q8WUY8 206 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ARRDC3Q96B67 414 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 SLC30A3Q99726 388 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 MRPL57Q9BQC6 102 aaKnown RBP17.92■□□□□ 0.46
COMMD4-208ENST00000563220 MRPL46Q9H2W6 279 aaKnown RBP17.92■□□□□ 0.46
COMMD4-208ENST00000563220 POPDC3Q9HBV1 291 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 OXSMQ9NWU1 459 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 TAS2R13Q9NYV9 303 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 NIPSNAP2O75323 286 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 SERPINE1P05121 402 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 MYL2P10916 166 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ZNF37AP17032 561 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-208ENST00000563220 XPAP23025 273 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ACRV1P26436 265 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ARRB2P32121 409 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 PDAP1Q13442 181 aaKnown RBP17.92■□□□□ 0.46
COMMD4-208ENST00000563220 ITIH4Q14624 930 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 TECRLQ5HYJ1 363 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 PAQR3Q6TCH7 311 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 NAPRTQ6XQN6 538 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 DPPA4Q7L190 304 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 DENND4AQ7Z401 1863 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 RDH11Q8TC12 318 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 C7orf26Q96N11 449 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 GPR21Q99679 349 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 PRSS16Q9NQE7 514 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 THAP1Q9NVV9 213 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 CD84Q9UIB8 345 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 CRLS1Q9UJA2 301 aa17.92■□□□□ 0.46
COMMD4-208ENST00000563220 MUC22E2RYF6 1773 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 IQCF5A8MTL0 148 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 ANKRD65E5RJM6 399 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 SOX1O00570 391 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 PRMT5O14744 637 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 DLX3O60479 287 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 TRIM13O60858 407 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 LYPLA1O75608 230 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 ESR1P03372 595 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 EPHX1P07099 455 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 KCNC1P48547 511 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 ACAP2Q15057 778 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 GPR33Q49SQ1 333 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 PREPLQ4J6C6 727 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 ATP13A5Q4VNC0 1218 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 ISCA2Q86U28 154 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 EZH1Q92800 747 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 SGF29Q96ES7 293 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 PLEKHG4BQ96PX9 1271 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 NPHS2Q9NP85 383 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 MID2Q9UJV3 735 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 OAS3Q9Y6K5 1087 aaKnown RBP17.91■□□□□ 0.46
COMMD4-208ENST00000563220 PRSS21Q9Y6M0 314 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 KIAA1549LQ6ZVL6 1849 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 EYSQ5T1H1 3165 aa17.91■□□□□ 0.46
COMMD4-208ENST00000563220 PLK4O00444 970 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 CD1DP15813 335 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 CD9P21926 228 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 MMP12P39900 470 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms