RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 KDM7AQ6ZMT4 941 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TCEAL3Q969E4 200 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 SCRN2Q96FV2 425 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 FSCN3Q9NQT6 498 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 IL1RAPL1Q9NZN1 696 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 NCDNQ9UBB6 729 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 CTNNAL1Q9UBT7 734 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 KCTD3Q9Y597 815 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 A0A1W2PPC4 97 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 AURKAO14965 403 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TGM1P22735 817 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 LHCGRP22888 699 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 ATP5DP30049 168 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 ZNF140P52738 457 aaPredicted RBP22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TMEM52BQ4KMG9 183 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 HSP90AA5PQ58FG0 334 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TTMPQ5BVD1 217 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 PLA2G2CQ5R387 149 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 NEK5Q6P3R8 708 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TSPAN33Q86UF1 283 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 SYT12Q8IV01 421 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 GABPB2Q8TAK5 448 aaPredicted RBP22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 DCAKDQ8WVC6 231 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 MCCC1Q96RQ3 725 aaPredicted RBP22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 MYOCQ99972 504 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 GPR63Q9BZJ6 419 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TBK1Q9UHD2 729 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 ZNF180Q9UJW8 692 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 GMEB2Q9UKD1 530 aa22.37■■□□□ 1.17
SYNGR3-202ENST00000562045 TP53BP1Q12888 1972 aaPredicted RBP22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 RIF1Q5UIP0 2472 aaKnown RBP22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 GOLGA8CPA6NN73 597 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 HMGB1P1B2RPK0 211 aaPredicted RBP22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 RAD51BO15315 384 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 SLC31A1O15431 190 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 CD27P26842 260 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 ARNTP27540 789 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 HNF1BP35680 557 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 PRAMEP78395 509 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 WDR45BQ5MNZ6 344 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 TTC30BQ8N4P2 665 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 OR13C4Q8NGS5 318 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 DNAJC1Q96KC8 554 aaKnown RBP22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 SLC6A18Q96N87 628 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 NLE1Q9NVX2 485 aaPredicted RBP22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 NSMCE4AQ9NXX6 385 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 TXNDC16Q9P2K2 825 aa22.36■■□□□ 1.17
SYNGR3-202ENST00000562045 BUD23O43709 281 aaKnown RBP22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 PAK4O96013 591 aaPredicted RBP22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 GM2AP17900 193 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 PSMA3P25788 255 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 HMGCLP35914 325 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 LIG3P49916 1009 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 RPS21P63220 83 aaKnown RBP22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 ELP6Q0PNE2 266 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 THOC5Q13769 683 aaKnown RBP22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 TEDDM1Q5T9Z0 273 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 KIAA1161Q6NSJ0 714 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 ERAP2Q6P179 960 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 DPPA4Q7L190 304 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 CNPY4Q8N129 248 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 C19orf43Q9BQ61 176 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 FAM167BQ9BTA0 163 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 C1QTNF2Q9BXJ5 285 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 SLC17A9Q9BYT1 436 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 ZFYVE1Q9HBF4 777 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 PCDHGA5Q9Y5G8 931 aa22.35■■□□□ 1.17
SYNGR3-202ENST00000562045 C1orf232A0A0U1RR37 186 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 STX7O15400 261 aaKnown RBP22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 GFRA3O60609 400 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 SLC4A1P02730 911 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 C6P13671 934 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 HADHAP40939 763 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 SUOXP51687 545 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 TMED2Q15363 201 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 SMAD1Q15797 465 aaKnown RBP22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 TNFAIP8L3Q5GJ75 292 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 KCTD16Q68DU8 428 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 LYSMD3Q7Z3D4 306 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 CNTN4Q8IWV2 1026 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 KRT222Q8N1A0 295 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 OR4K2Q8NGD2 314 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 CALML6Q8TD86 181 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 CXorf40AQ8TE69 158 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 HDAC10Q969S8 669 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 CPNE1Q99829 537 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 TM9SF3Q9HD45 589 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 IARS2Q9NSE4 1012 aaKnown RBP22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 PKP3Q9Y446 797 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 PCDH15Q96QU1 1955 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 MYLKQ15746 1914 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 IQANK1A0A1B0GTG1 560 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 SERPINB9P50453 376 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 ARSDP51689 593 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 SF3A2Q15428 464 aaKnown RBP22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 LGSNQ5TDP6 509 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 LIPIQ6XZB0 460 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 LMNTD2Q8IXW0 634 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 OR6P1Q8NGX9 317 aa22.34■■□□□ 1.17
SYNGR3-202ENST00000562045 SERAC1Q96JX3 654 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms