RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TMPRSS9Q7Z410 1059 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF438Q7Z4V0 828 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 DAAM2Q86T65 1068 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 RAVER1Q8IY67 606 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 ARL14Q8N4G2 192 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 TEKT5Q96M29 485 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 PANX2Q96RD6 677 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 STRADBQ9C0K7 418 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 PRORYQ9H606 182 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZFYVE1Q9HBF4 777 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 ARFGAP3Q9NP61 516 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 CNOT6Q9ULM6 557 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 BAHCC1Q9P281 2608 aa17.07■□□□□ 0.32
CDC42BPB-208ENST00000561271 RHPN2P1A8MT19 583 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 PLD2O14939 933 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 DNAJC6O75061 913 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZRANB2O95218 330 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 FECHP22830 423 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 CD68P34810 354 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 OR1D5P58170 312 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 B4GALNT1Q00973 533 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 BIRC2Q13490 618 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 NOMO1Q15155 1222 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 AMZ1Q400G9 498 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 SOWAHCQ53LP3 525 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 BZW1Q7L1Q6 419 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 RAB11FIP2Q7L804 512 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 P3H4Q92791 437 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 RBM41Q96IZ5 413 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 TMEM74Q96NL1 305 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 BBC3Q96PG8 261 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 QKIQ96PU8 341 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 RDH14Q9HBH5 336 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 VPS18Q9P253 973 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 KLHL8Q9P2G9 620 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNHIT2Q9UHR6 403 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 REXO2Q9Y3B8 237 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 SPO11Q9Y5K1 396 aa17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 EPN1Q9Y6I3 576 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-208ENST00000561271 SMG1Q96Q15 3661 aaKnown RBP17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 NDST3O95803 873 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 EML2O95834 649 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 ITGA2BP08514 1039 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 ALDH4A1P30038 563 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 UGT1A5P35504 534 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 CXADRP78310 365 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF569Q5MCW4 686 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF648Q5T619 568 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 PHF19Q5T6S3 580 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 CLEC14AQ86T13 490 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 GAS2L3Q86XJ1 694 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 RCOR2Q8IZ40 523 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 FBXO39Q8N4B4 442 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 GPR26Q8NDV2 337 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 ACRBPQ8NEB7 543 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 NUDT22Q9BRQ3 303 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 HERPUD2Q9BSE4 406 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 SPATA16Q9BXB7 569 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 HEMGNQ9BXL5 484 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 GPR63Q9BZJ6 419 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 MAGEE1Q9HCI5 957 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 PISDQ9UG56 409 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 LOXL2Q9Y4K0 774 aa17.05■□□□□ 0.32
CDC42BPB-208ENST00000561271 MACROD2A1Z1Q3 448 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 RGSL1A5PLK6 1076 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 TMX2-CTNND1H3BSU7 103 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 AURKAO14965 403 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 KLK10O43240 276 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 B4GAT1O43505 415 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 IPO7O95373 1038 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 CPNE6O95741 557 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 ACP5P13686 325 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 CTNNA1P35221 906 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 MLLT3P42568 568 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 DCDC1P59894 354 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZFP36L1Q07352 338 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 EIF3IQ13347 325 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 PEX6Q13608 980 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 LRP8Q14114 963 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 NR1D2Q14995 579 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 PPP2R5EQ16537 467 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 KDELC1Q6UW63 502 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 BBS12Q6ZW61 710 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 CHST15Q7LFX5 561 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF761Q86XN6 746 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 JAMLQ86YT9 394 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 TMTC1Q8IUR5 882 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 SLITRK4Q8IW52 837 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF567Q8N184 647 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 SLC37A2Q8TED4 501 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 SEMA6CQ9H3T2 930 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 NFKBIL1Q9UBC1 381 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 KCNK6Q9Y257 313 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 DUSP10Q9Y6W6 482 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 COL6A6A6NMZ7 2263 aa17.04■□□□□ 0.32
CDC42BPB-208ENST00000561271 TRBV23OR9-2A0A075B6M9 112 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 PPM1DO15297 605 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms