RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PPP2R5EQ16537 467 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 PYCR3Q53H96 274 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 SPOCD1Q6ZMY3 1216 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 MARK2Q7KZI7 788 aaKnown RBP15.86■□□□□ 0.13
LMX1B-204ENST00000561065 LYSMD3Q7Z3D4 306 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 NLRP8Q86W28 1048 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 SLITRK4Q8IW52 837 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 NRSN1Q8IZ57 195 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 TFB1MQ8WVM0 346 aaKnown RBP15.86■□□□□ 0.13
LMX1B-204ENST00000561065 KCNE4Q8WWG9 221 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 HAUS1Q96CS2 278 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 IMP4Q96G21 291 aaKnown RBP15.86■□□□□ 0.13
LMX1B-204ENST00000561065 AGAP3Q96P47 875 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 VAT1Q99536 393 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 SEPT10Q9P0V9 454 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 AMFRQ9UKV5 643 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 PCDHA3Q9Y5H8 950 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 AHCTF1Q8WYP5 2266 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 FASNP49327 2511 aaKnown RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 BAHCC1Q9P281 2608 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 MIF4GDA9UHW6 222 aaKnown RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 HACD1B0YJ81 288 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ANKRD66B4E2M5 251 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 AGRPO00253 132 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 PLD2O14939 933 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 B4GAT1O43505 415 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 DNAJC6O75061 913 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 EML2O95834 649 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ATP1A1P05023 1023 aaKnown RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ITGA2BP08514 1039 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 PIRTP0C851 137 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 CTNNA2P26232 953 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 RBMS1P29558 406 aaKnown RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ACTR1BP42025 376 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ACTR1AP61163 376 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ZFP36L1Q07352 338 aaKnown RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 COL9A2Q14055 689 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 KAZNQ674X7 775 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 RAB11FIP2Q7L804 512 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 NT5DC3Q86UY8 548 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 ARL14Q8N4G2 192 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 RNF10Q8N5U6 811 aaKnown RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 SPATA22Q8NHS9 363 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 CCHCR1Q8TD31 782 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 MLPHQ9BV36 600 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-204ENST00000561065 CDH19Q9H159 772 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 RDH14Q9HBH5 336 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 CPNE5Q9HCH3 593 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 PRKAB1Q9Y478 270 aa15.85■□□□□ 0.13
LMX1B-204ENST00000561065 GOLGA6L9A6NEM1 432 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 KLK10O43240 276 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 KRT86O43790 486 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 TJP3O95049 919 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 MT-CYBP00156 380 aaPredicted RBP15.84■□□□□ 0.13
LMX1B-204ENST00000561065 ITIH1P19827 911 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 PTPN3P26045 913 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 CTNNA1P35221 906 aaKnown RBP15.84■□□□□ 0.13
LMX1B-204ENST00000561065 UGT1A5P35504 534 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 ETV5P41161 510 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 OR1D5P58170 312 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 CXADRP78310 365 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 XRCC4Q13426 336 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 PCSK4Q6UW60 755 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 RAD9BQ6WBX8 426 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 PEX26Q7Z412 305 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 KDELC2Q7Z4H8 507 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 LRRC45Q96CN5 670 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 NUDT22Q9BRQ3 303 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 SLC25A51Q9H1U9 297 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 SEMA6CQ9H3T2 930 aa15.84■□□□□ 0.13
LMX1B-204ENST00000561065 ZNF106Q9H2Y7 1883 aaKnown RBP15.84■□□□□ 0.13
LMX1B-204ENST00000561065 PPM1DO15297 605 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 ARHGAP6O43182 974 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 STK10O94804 968 aaKnown RBP15.83■□□□□ 0.12
LMX1B-204ENST00000561065 SLC4A1P02730 911 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 CSF2RBP32927 897 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 CD68P34810 354 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-204ENST00000561065 MLLT3P42568 568 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-204ENST00000561065 WASHC5Q12768 1159 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 CLN3Q13286 438 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 PEX6Q13608 980 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 C16orf72Q14CZ0 275 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 PCSK7Q16549 785 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 MAP9Q49MG5 647 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 TEX44Q53QW1 395 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 GALNT13Q8IUC8 556 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 FBXO39Q8N4B4 442 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 ANP32BQ92688 251 aaKnown RBP15.83■□□□□ 0.12
LMX1B-204ENST00000561065 KRT35Q92764 455 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 TMEM74Q96NL1 305 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 UBL7Q96S82 380 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-204ENST00000561065 GLOD4Q9HC38 313 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 PKD2L2Q9NZM6 624 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 VPS18Q9P253 973 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 TRHDEQ9UKU6 1024 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 SHOC2Q9UQ13 582 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF711Q9Y462 761 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 LOXL2Q9Y4K0 774 aa15.83■□□□□ 0.12
LMX1B-204ENST00000561065 SPO11Q9Y5K1 396 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms