RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 C3orf70A6NLC5 250 aaPredicted RBP16.09■□□□□ 0.17
SNX1-213ENST00000561026 DNAJC6O75061 913 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 CD82P27701 267 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 ARHGAP25P42331 645 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 FASLGP48023 281 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 ZBTB17Q13105 803 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
SNX1-213ENST00000561026 TRA2AQ13595 282 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■□□□ 12.9
SNX1-213ENST00000561026 HENMT1Q5T8I9 393 aaKnown RBP16.09■□□□□ 0.17
SNX1-213ENST00000561026 VSIG1Q86XK7 387 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 SFRP1Q8N474 314 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 CCHCR1Q8TD31 782 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 SGF29Q96ES7 293 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 MED8Q96G25 268 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 DPYSL5Q9BPU6 564 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 KCNK4Q9NYG8 393 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 PCDHB11Q9Y5F2 797 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 HEY1Q9Y5J3 304 aa16.09■□□□□ 0.17
SNX1-213ENST00000561026 PCYT1BQ9Y5K3 369 aaPredicted RBP16.09■□□□□ 0.17
SNX1-213ENST00000561026 OAS3Q9Y6K5 1087 aaKnown RBP16.09■□□□□ 0.17
SNX1-213ENST00000561026 TRBV23OR9-2A0A075B6M9 112 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 FADS2P1A8MWK0 482 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.08■□□□□ 0.16
SNX1-213ENST00000561026 CBFA2T2O43439 604 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 EML2O95834 649 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 FGF3P11487 239 aaPredicted RBP16.08■□□□□ 0.16
SNX1-213ENST00000561026 CSF2RBP32927 897 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 GPLD1P80108 840 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 CHST15Q7LFX5 561 aaPredicted RBP16.08■□□□□ 0.16
SNX1-213ENST00000561026 SLC37A2Q8TED4 501 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 EID2BQ96D98 161 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 CHP1Q99653 195 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 RMI1Q9H9A7 625 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 PKD2L2Q9NZM6 624 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 PRKAB1Q9Y478 270 aa16.08■□□□□ 0.16
SNX1-213ENST00000561026 MTA2O94776 668 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 THRAP10827 490 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 PTMSP20962 102 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 MPSTP25325 297 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 AP1B1Q10567 949 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 PDK1Q15118 436 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 MANEAQ5SRI9 462 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 TMEM71Q6P5X7 295 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 AGBL5Q8NDL9 886 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.07■□□□□ 0.16
SNX1-213ENST00000561026 IMP4Q96G21 291 aaKnown RBP16.07■□□□□ 0.16
SNX1-213ENST00000561026 CCDC42Q96M95 316 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 TAAR9Q96RI9 348 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 TRIB3Q96RU7 358 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 SLC38A3Q99624 504 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 MAK16Q9BXY0 300 aaKnown RBP16.07■□□□□ 0.16
SNX1-213ENST00000561026 ABHD10Q9NUJ1 306 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 SPTLC3Q9NUV7 552 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 TBC1D29Q9UFV1 150 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 PCDHGA3Q9Y5H0 932 aa16.07■□□□□ 0.16
SNX1-213ENST00000561026 BOD1L1Q8NFC6 3051 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 B8ZZF3 427 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 APOL1O14791 398 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 ZFXP17010 805 aaPredicted RBP16.06■□□□□ 0.16
SNX1-213ENST00000561026 GALNT3Q14435 633 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.06■□□□□ 0.16
SNX1-213ENST00000561026 FAM182AQ5T1J6 154 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 LRRC38Q5VT99 294 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 IYDQ6PHW0 289 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 LYSMD3Q7Z3D4 306 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 KDELC2Q7Z4H8 507 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 NT5DC3Q86UY8 548 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 VASH2Q86V25 355 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 ZNF761Q86XN6 746 aaPredicted RBP16.06■□□□□ 0.16
SNX1-213ENST00000561026 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 RHOT2Q8IXI1 618 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 OR10G6Q8NH81 332 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 AGAP3Q96P47 875 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 CEP41Q9BYV8 373 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
SNX1-213ENST00000561026 ZFYVE1Q9HBF4 777 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 SARS2Q9NP81 518 aaKnown RBP16.06■□□□□ 0.16
SNX1-213ENST00000561026 TMEM9Q9P0T7 183 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 PDP2Q9P2J9 529 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 KCNK6Q9Y257 313 aa16.06■□□□□ 0.16
SNX1-213ENST00000561026 A6NCN8 305 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 STMND1H3BQB6 276 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 ITGB2P05107 769 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 TPM1P09493 284 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 ACP5P13686 325 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 CSTF2P33240 577 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNX1-213ENST00000561026 ARSDP51689 593 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 HHEXQ03014 270 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 LINC00303Q3SY05 128 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 NPNTQ6UXI9 565 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 PMEPA1Q969W9 287 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 TADA1Q96BN2 335 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 AHCYL2Q96HN2 611 aaKnown RBP16.05■□□□□ 0.16
SNX1-213ENST00000561026 HERPUD2Q9BSE4 406 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 BRD8Q9H0E9 1235 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 SLC25A51Q9H1U9 297 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 CARD9Q9H257 536 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 MAGEE1Q9HCI5 957 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms