RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CAPNS1P04632 268 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PIM1P11309 404 aaPredicted RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 MTHFD2P13995 350 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 GFAPP14136 432 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 HNRNPLP14866 589 aaKnown RBP eCLIP9.65□□□□□ -0.86
RTF1-206ENST00000560447 HMGCLP35914 325 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 CCR10P46092 362 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 RGRP47804 291 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 HSPA13P48723 471 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PLK1P53350 603 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PKNOX1P55347 436 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 IL2P60568 153 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 RHOAP61586 193 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 SMAD3P84022 425 aaKnown RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 TRAF2Q12933 501 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 LRP8Q14114 963 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 FASTKQ14296 549 aaKnown RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 UGT3A2Q3SY77 523 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 SAMD4BQ5PRF9 694 aaKnown RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 TTC23LQ6PF05 361 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 RNF165Q6ZSG1 346 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 HTR3DQ70Z44 454 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 DNAJB7Q7Z6W7 309 aaPredicted RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 HPS6Q86YV9 775 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 GALNT13Q8IUC8 556 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 CBARPQ8N350 705 aaPredicted RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 SPATA6LQ8N4H0 392 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 MDGA1Q8NFP4 955 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 OR52K2Q8NGK3 314 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 ZNF483Q8TF39 744 aaPredicted RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 ASB9Q96DX5 294 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PHF21BQ96EK2 531 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 C19orf60Q96EN9 201 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 TMA16Q96EY4 203 aaKnown RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 CDRT15Q96T59 188 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 HOPXQ9BPY8 73 aaPredicted RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 FEM1AQ9BSK4 669 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 OSBPL1AQ9BXW6 950 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 KLHL4Q9C0H6 718 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 RNF38Q9H0F5 515 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 SUDS3Q9H7L9 328 aaPredicted RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 CYP4F12Q9HCS2 524 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 IL17CQ9P0M4 197 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PDP2Q9P2J9 529 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 KLHL42Q9P2K6 505 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 SCOCQ9UIL1 159 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 APPL1Q9UKG1 709 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 CNOT11Q9UKZ1 510 aaKnown RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 PPM1HQ9ULR3 514 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 RNF112Q9ULX5 631 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 NDUFAF1Q9Y375 327 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 PKP3Q9Y446 797 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 TRIM17Q9Y577 477 aa9.65□□□□□ -0.86
RTF1-206ENST00000560447 TNPO3Q9Y5L0 923 aaKnown RBP9.65□□□□□ -0.86
RTF1-206ENST00000560447 UBA6A0AVT1 1052 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 TTC24A2A3L6 582 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 H0YJX3 145 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 HTRA2O43464 458 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 NRP2O60462 931 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 GREM1O60565 184 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 SKAP2O75563 359 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 PDE5AO76074 875 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 BAIAP3O94812 1187 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 FGF19O95750 216 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 BAG2O95816 211 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 CHEK2O96017 543 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 SLC4A1P02730 911 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 JUNP05412 331 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 IDO1P14902 403 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 LBPP18428 481 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 RPL17P18621 184 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 MC4RP32245 332 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 ABL2P42684 1182 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 CCL23P55773 120 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 C1QTNF8P60827 252 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 PSME3P61289 254 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 TLE2Q04725 743 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 CLCQ05315 142 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 TWF1Q12792 350 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 FLOT2Q14254 428 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 OR4D1Q15615 310 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 PTPRNQ16849 979 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 SMU1Q2TAY7 513 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MMEL1Q495T6 779 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 GPR33Q49SQ1 333 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MPPE1Q53F39 396 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 SETMARQ53H47 684 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 RARS2Q5T160 578 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 SPOUT1Q5T280 376 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 ARMC12Q5T9G4 340 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 OGFRL1Q5TC84 451 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 TMEM198Q66K66 360 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 C8orf82Q6P1X6 216 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 PAQR3Q6TCH7 311 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 IZUMO2Q6UXV1 221 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.64□□□□□ -0.87
RTF1-206ENST00000560447 PRR23BQ6ZRT6 265 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 CCDC149Q6ZUS6 474 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 ADAMTSL2Q86TH1 951 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms