RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 CD84Q9UIB8 345 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 IGLV3-22A0A075B6J6 115 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 WARSP23381 471 aaKnown RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 EPHA3P29320 983 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 CDH5P33151 784 aaPredicted RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 MASP1P48740 699 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 ART4Q93070 314 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 FRMD6Q96NE9 622 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 FNDC11Q9BVV2 318 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 TNFAIP8O95379 198 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 LEMD2Q8NC56 503 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 Q96MT0 163 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 FGFBP2Q9BYJ0 223 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 CLN6Q9NWW5 311 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 SATB2Q9UPW6 733 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 CROCCQ5TZA2 2017 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 MED26O95402 600 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 C22orf31O95567 290 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 PPIBP23284 216 aaKnown RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 DNAJB7Q7Z6W7 309 aaPredicted RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 LCN9Q8WX39 176 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 MCMBPQ9BTE3 642 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 STK16O75716 305 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 AP2A1O95782 977 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 DUPD1Q68J44 220 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 MON1BQ7L1V2 547 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 SLC45A1Q9Y2W3 748 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 H3BQF6 201 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 NRP1O14786 923 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MATN4O95460 622 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 ARF5P84085 180 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 PDK4Q16654 411 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 SPANXN2Q5MJ10 180 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 GDF6Q6KF10 455 aaPredicted RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 CNKSR3Q6P9H4 555 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 RP9Q8TA86 221 aaKnown RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 ALG3Q92685 438 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 OR10H3O60404 316 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TM7SF2O76062 418 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 GPD2P43304 727 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TIMM50Q3ZCQ8 353 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 HECTD2Q5U5R9 776 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 SLC22A17Q8WUG5 538 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 CAB39LQ9H9S4 337 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MYRFQ9Y2G1 1151 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 PNMA8CA0A1B0GUJ8 204 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 RCCD1A6NED2 376 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 IQCF5A8MTL0 148 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 DGKEP52429 567 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 USP4Q13107 963 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 RFTN2Q52LD8 501 aaPredicted RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MATN3O15232 486 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 C2P06681 752 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 RCVRNP35243 200 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TNK2Q07912 1038 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TCEAL5Q5H9L2 206 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 CHST15Q7LFX5 561 aaPredicted RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TBATAQ96M53 351 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MAT2BQ9NZL9 334 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 SLC22A3O75751 556 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TRBC1P01850 177 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 IL6P05231 212 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TPSB2P20231 275 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 FSHRP23945 695 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 LGALS3BPQ08380 585 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 TPSAB1Q15661 275 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 ARHGAP36Q6ZRI8 547 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 ADAMTS15Q8TE58 950 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 NTPCRQ9BSD7 190 aaKnown RBP13.4□□□□□ -0.26
TRAF3-208ENST00000560371 MFHAS1Q9Y4C4 1052 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 NUP98P52948 1817 aa13.4□□□□□ -0.26
TRAF3-208ENST00000560371 NT5EP21589 574 aa13.4□□□□□ -0.27
TRAF3-208ENST00000560371 TMED10P49755 219 aaKnown RBP13.4□□□□□ -0.27
TRAF3-208ENST00000560371 UGT2B15P54855 530 aa13.4□□□□□ -0.27
TRAF3-208ENST00000560371 DAOAP59103 153 aa13.4□□□□□ -0.27
TRAF3-208ENST00000560371 C3orf18Q9UK00 162 aa13.4□□□□□ -0.27
TRAF3-208ENST00000560371 ALOX15BO15296 676 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 ASMTP46597 345 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 GABRB2P47870 512 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 CDC42P60953 191 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 EPS8Q12929 822 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 PRR23BQ6ZRT6 265 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 DNAJC11Q9NVH1 559 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 CYP4F8P98187 520 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 IL10RBQ08334 325 aa13.39□□□□□ -0.27
TRAF3-208ENST00000560371 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms