RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CHST15Q7LFX5 561 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 LYSMD3Q7Z3D4 306 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 SLC9B2Q86UD5 537 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 PLXDC1Q8IUK5 500 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 EXD1Q8NHP7 514 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 RNF31Q96EP0 1072 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 C9orf72Q96LT7 481 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 SMIM14Q96QK8 99 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 SNRNP25Q9BV90 132 aaKnown RBP19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 TRIM55Q9BYV6 548 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 VPS18Q9P253 973 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNHIT2Q9UHR6 403 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 CNOT6Q9ULM6 557 aaKnown RBP19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 PRKAB1Q9Y478 270 aa19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 ANKRD17O75179 2603 aaKnown RBP19.57■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNF106Q9H2Y7 1883 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 CSMD1Q96PZ7 3565 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 CDC14CA4D256 554 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 DAPK3O43293 454 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 FZD6O60353 706 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 KATNA1O75449 491 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 DNAJB5O75953 348 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 PDHA1P08559 390 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 F3P13726 295 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 CTPS1P17812 591 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 MAPK9P45984 424 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 NOP2P46087 812 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 GFERP55789 205 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 FOXM1Q08050 763 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 DPYSQ14117 519 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNF235Q14590 738 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 IL11RAQ14626 422 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 RALGPS1Q5JS13 557 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 LRRC66Q68CR7 880 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 USP45Q70EL2 814 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 HERPUD2Q9BSE4 406 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 STN1Q9H668 368 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 MLXIPLQ9NP71 852 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 FAM207AQ9NSI2 230 aaPredicted RBP19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 CWC15Q9P013 229 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 CPNE7Q9UBL6 633 aa19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 OAS3Q9Y6K5 1087 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-214ENST00000560163 HIVEP3Q5T1R4 2406 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 KIR2DS5A0A0G2JLQ3 304 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 A0A0G2JNG1 304 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 A1L4Q6 167 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 LILRA5A6NI73 299 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 KIR2DS3K7RE56 304 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 TOX3O15405 576 aaPredicted RBP19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 KIAA0754O94854 1291 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 SORBS2O94875 1100 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 ATP1A1P05023 1023 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 PYGLP06737 847 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 EEF1GP26641 437 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 SH3BP2P78314 561 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 KIR2DS5Q14953 304 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 DPCR1Q3MIW9 517 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 ARMC12Q5T9G4 340 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNF787Q6DD87 383 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 DCUN1D2Q6PH85 259 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 MCOLN2Q8IZK6 566 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 RIOK2Q9BVS4 552 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 TWSG1Q9GZX9 223 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 CNOT8Q9UFF9 292 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 PCSK1NQ9UHG2 260 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 MED13Q9UHV7 2174 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 KCNK6Q9Y257 313 aa19.55■□□□□ 0.72
RABGGTA-214ENST00000560163 PIPSLA2A3N6 862 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 WIPF3A6NGB9 483 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 INPP4BO15327 924 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 MAFKO60675 156 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 NDUFA10O95299 355 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 DDAH2O95865 285 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 FGF5P12034 268 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 MAXP61244 160 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 UBE2IP63279 158 aaKnown RBP19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 BECN1Q14457 450 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 NADK2Q4G0N4 442 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 STAMBPL1Q96FJ0 436 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 OR6C1Q96RD1 312 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 WDR24Q96S15 920 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNF768Q9H5H4 540 aaKnown RBP19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 UCK1Q9HA47 277 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 TAB2Q9NYJ8 693 aa19.54■□□□□ 0.72
RABGGTA-214ENST00000560163 OR5K4A6NMS3 321 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 ASMTLO95671 621 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNF30P17039 623 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 COL8A1P27658 744 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 GARSP41250 739 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 STC1P52823 247 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 MAMLD1Q13495 774 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 IHHQ14623 411 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 PPP6R3Q5H9R7 873 aaPredicted RBP19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 PAPD7Q5XG87 772 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 PSTKQ8IV42 348 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 PLEKHG4BQ96PX9 1271 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 AGPAT1Q99943 283 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 PADI1Q9ULC6 663 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 SIK3Q9Y2K2 1263 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms