RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 A0A087X0B3 334 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ISM1B1AKI9 464 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 AIPO00170 330 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 SSX5O60225 188 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 RENP00797 406 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 DDX6P26196 483 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ACVR2AP27037 513 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 MASP1P48740 699 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TLE2Q04725 743 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 SPATA22Q8NHS9 363 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 RHBDF1Q96CC6 855 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 USP12O75317 370 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TACSTD2P09758 323 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 IL12BP29460 328 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 NAGLUP54802 743 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 C16orf46Q6P387 395 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 C16orf59Q7L2K0 433 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZBTB46Q86UZ6 589 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ADAMTS15Q8TE58 950 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 CIDECQ96AQ7 238 aaPredicted RBP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 MIPEPQ99797 713 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TNFRSF11BO00300 401 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ASMTP46597 345 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 NDUFA9Q16795 377 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 COLEC12Q5KU26 742 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF226Q9NYT6 803 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 EGFL7Q9UHF1 273 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 FADS3Q9Y5Q0 445 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 VSTM5A8MXK1 200 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 PRKD3O94806 890 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 CCR10P46092 362 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 RAB27AP51159 221 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TPTEP56180 551 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 HERVK_113P62684 666 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ERVK-24P63145 666 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 SYCE2Q6PIF2 218 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 HSPA12BQ96MM6 686 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TRIM36Q9NQ86 728 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 PXMP2Q9NR77 195 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 FAM237BA0A1B0GVD1 139 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ANGPTL1O95841 491 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 LAMP2P13473 410 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 NAE1Q13564 534 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 C2orf76Q3KRA6 126 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 CLEC17AQ6ZS10 378 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF280BQ86YH2 543 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ARRDC4Q8NCT1 418 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 METTL21AQ8WXB1 218 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 SNTG1Q9NSN8 517 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 POLR3HQ9Y535 204 aaPredicted RBP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF878C9JN71 531 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 I3L521 148 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 CREB5Q02930 508 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 GNA12Q03113 381 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ADAM15Q13444 863 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ARFRP1Q13795 201 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 DPYSL3Q14195 570 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 PUM1Q14671 1186 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 CARTPTQ16568 116 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ATP6V1C2Q8NEY4 427 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 IRF2BPLQ9H1B7 796 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 LYARQ9NX58 379 aaKnown RBP13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 BTRCQ9Y297 605 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 KDM5CP41229 1560 aa13.79□□□□□ -0.2
CSPG4P12-202ENST00000559989 EML1O00423 815 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PCDHGA12O60330 932 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 NRP2O60462 931 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZMPSTE24O75844 475 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PRAMEF1O95521 474 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 VTNP04004 478 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 GLI1P08151 1106 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 AMPD1P23109 780 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PFKPQ01813 784 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF155Q12901 538 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PHC2Q8IXK0 858 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 KAT2AQ92830 837 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 EQTNQ9NQ60 294 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 DNAAF2Q9NVR5 837 aaKnown RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CLUHO75153 1309 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TRAV19A0A0A6YYK7 116 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CCRL2O00421 344 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 DLSTP36957 453 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 MAPK12P53778 367 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF311Q5JNZ3 666 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 NEPROQ6NW34 567 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 HJURPQ8NCD3 748 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms