RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 CDRT15Q96T59 188 aa14.4□□□□□ -0.1
RABGGTA-212ENST00000559974 FEM1AQ9BSK4 669 aa14.4□□□□□ -0.1
RABGGTA-212ENST00000559974 TTYH1Q9H313 450 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-212ENST00000559974 ZNF334Q9HCZ1 680 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-212ENST00000559974 HACD3Q9P035 362 aa14.4□□□□□ -0.1
RABGGTA-212ENST00000559974 SCN8AQ9UQD0 1980 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 SCAMP3O14828 347 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 PFDN6O15212 129 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 STX7O15400 261 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 SIX3O95343 332 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 PYGLP06737 847 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 SPATA31D3P0C874 917 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 GFAPP14136 432 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 ARSAP15289 507 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 TTPAP49638 278 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 CDKN1CP49918 316 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 CDH13P55290 713 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 RHOAP61586 193 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 PPP1R3AQ16821 1122 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 PTPRNQ16849 979 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 PFKFB4Q16877 469 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 PSAPL1Q6NUJ1 521 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 CYHR1Q6ZMK1 362 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 GK5Q6ZS86 529 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 SPATA31D4Q6ZUB0 917 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 ADGRD2Q7Z7M1 963 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 KBTBD6Q86V97 674 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 CLYBLQ8N0X4 340 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 TTC30BQ8N4P2 665 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 ADAMTS19Q8TE59 1207 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 BIRC8Q96P09 236 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 MYCBPQ99417 103 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 NPAS2Q99743 824 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 CXorf56Q9H5V9 222 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 OR51B4Q9Y5P0 310 aa14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 OAS3Q9Y6K5 1087 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 ZNF106Q9H2Y7 1883 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-212ENST00000559974 H7C0S8 307 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 GFRA2O00451 464 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 TEX28O15482 410 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 GREM1O60565 184 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 GPC4O75487 556 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CXCL14O95715 111 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 OLFM2O95897 454 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CNPP09543 421 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CTSAP10619 480 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CSKP41240 450 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 THOP1P52888 689 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 SH3BP2P78314 561 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 FASTKQ14296 549 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 ZNF423Q2M1K9 1284 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 UGT3A2Q3SY77 523 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 RNF111Q6ZNA4 994 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 Q6ZNB5 142 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 LARP4Q71RC2 724 aaKnown RBP eCLIP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 ITIH5Q86UX2 942 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PIANPQ8IYJ0 282 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 ARL14EPQ8N8R7 260 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 HMGCLL1Q8TB92 370 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 C19orf60Q96EN9 201 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 GPR21Q99679 349 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 MRPL1Q9BYD6 325 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 UTP6Q9NYH9 597 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 VPS51Q9UID3 782 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PACSIN3Q9UKS6 424 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 RNF112Q9ULX5 631 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 SUPT3HB4E1H0 165 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PSMD12O00232 456 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PER2O15055 1255 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CFLARO15519 480 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 FZD6O60353 706 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 VPS26AO75436 327 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 SUPT3HO75486 399 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CDK14O94921 469 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 FGF4P08620 206 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PKMP14618 531 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CD9P21926 228 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 ZXDBP98169 803 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 KLC1Q07866 573 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 STX5Q13190 355 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CDH18Q13634 790 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PABPC1LQ4VXU2 614 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 ZRANB3Q5FWF4 1079 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 AARS2Q5JTZ9 985 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 TXNDC8Q6A555 127 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 IRGCQ6NXR0 463 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 IZUMO2Q6UXV1 221 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 FBXO39Q8N4B4 442 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 NKAPQ8N5F7 415 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 DCAF4L2Q8NA75 395 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 IL21Q9HBE4 155 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 BPIFA1Q9NP55 256 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 MID1IP1Q9NPA3 183 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 TLR9Q9NR96 1032 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 FCF1Q9Y324 198 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 CPQQ9Y646 472 aa14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 PRRC2BQ5JSZ5 2229 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-212ENST00000559974 SYCE1LA8MT33 242 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms