RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 F8W8V4 182 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 CHUKO15111 745 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 PIGNO95427 931 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 ENO1P06733 434 aaKnown RBP17.71■□□□□ 0.43
SNX1-208ENST00000559844 PDHA1P08559 390 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 SLC8A1P32418 973 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 MAPK8P45983 427 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 SLC6A11P48066 632 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 SUOXP51687 545 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 SEMA3AQ14563 771 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 ARL13AQ5H913 290 aaPredicted RBP17.71■□□□□ 0.43
SNX1-208ENST00000559844 IER5LQ5T953 404 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 NAIF1Q69YI7 327 aaPredicted RBP17.71■□□□□ 0.43
SNX1-208ENST00000559844 TREML1Q86YW5 311 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 ARHGAP24Q8N264 748 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 FIBINQ8TAL6 211 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 CXorf51AA0A1B0GTR3 108 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 TRIM24O15164 1050 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 HDAC3O15379 428 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 CHRNGP07510 517 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 CTHP32929 405 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 OPRD1P41143 372 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 DGKGP49619 791 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 SEL1L3Q68CR1 1132 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 RINLQ6ZS11 566 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 TEX9Q8N6V9 391 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 AARSD1Q9BTE6 412 aaKnown RBP17.71■□□□□ 0.43
SNX1-208ENST00000559844 MUTYHQ9UIF7 546 aa17.71■□□□□ 0.43
SNX1-208ENST00000559844 FCF1Q9Y324 198 aaKnown RBP17.71■□□□□ 0.43
SNX1-208ENST00000559844 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 PRR5-ARHGAP8B1AHC4 643 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 MATN2O00339 956 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 GSC2O15499 205 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 FZD6O60353 706 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 MPSTP25325 297 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 HLA-FP30511 346 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 CD70P32970 193 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 CSNK1DP48730 415 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 ARHGAP8P85298 464 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 KDSRQ06136 332 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 ASTLQ6HA08 431 aaPredicted RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 ZNF549Q6P9A3 640 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 TMPRSS6Q8IU80 811 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 CCNYL1Q8N7R7 359 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 ZNF557Q8N988 423 aaPredicted RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 TXNDC5Q8NBS9 432 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 MCUR1Q96AQ8 359 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 MIPEPQ99797 713 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 CADM1Q9BY67 442 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 SLC2A11Q9BYW1 496 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 CCDC68Q9H2F9 335 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 MMADHCQ9H3L0 296 aaPredicted RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 ABCB8Q9NUT2 735 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 DEC1Q9P2X7 70 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 STX7O15400 261 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 NDUFS3O75489 264 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 IPO13O94829 963 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 MNAT1P51948 309 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 EPHB1P54762 984 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 RPL26P61254 145 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 LMAN2Q12907 356 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 PDAP1Q13442 181 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 UBAP2LQ14157 1087 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 WASHC2DQ5SRD0 308 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 ARMC12Q5T9G4 340 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 TRIM67Q6ZTA4 783 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 RALGPS2Q86X27 583 aaPredicted RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 KIRREL3Q8IZU9 778 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 FAM13CQ8NE31 585 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 ANKRD49Q8WVL7 239 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 SGF29Q96ES7 293 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 UNKQ9C0B0 810 aaKnown RBP17.7■□□□□ 0.42
SNX1-208ENST00000559844 SYTL2Q9HCH5 934 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 TAS2R1Q9NYW7 299 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 FBXO10Q9UK96 956 aa17.7■□□□□ 0.42
SNX1-208ENST00000559844 ATG2BQ96BY7 2078 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 A8MUI8 341 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 B2RBV5 119 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 H7C0S8 307 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 SLC4A1P02730 911 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 TFEBP19484 476 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 ABL2P42684 1182 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 MESP2Q0VG99 397 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 DNAL1Q4LDG9 190 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 SLC44A4Q53GD3 710 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 AARS2Q5JTZ9 985 aaKnown RBP17.69■□□□□ 0.42
SNX1-208ENST00000559844 VWA5B1Q5TIE3 1220 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 GRAMD4Q6IC98 578 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 TXNDC11Q6PKC3 985 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 APCDD1Q8J025 514 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 LSMEM2Q8N112 164 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 TTC30BQ8N4P2 665 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 MYO19Q96H55 970 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 C8orf33Q9H7E9 229 aaPredicted RBP17.69■□□□□ 0.42
SNX1-208ENST00000559844 EML4Q9HC35 981 aaKnown RBP17.69■□□□□ 0.42
SNX1-208ENST00000559844 MAGEE1Q9HCI5 957 aa17.69■□□□□ 0.42
SNX1-208ENST00000559844 CISD3P0C7P0 127 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 PABPC1P11940 636 aaKnown RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 CCND1P24385 295 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 EIF2DP41214 584 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms