RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ZNHIT2Q9UHR6 403 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 PCDHGA4Q9Y5G9 962 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 PCDHGA3Q9Y5H0 932 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 RP1P56715 2156 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 CFAP46Q8IYW2 2715 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 ZNF462Q96JM2 2506 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 SSU72P8A0A1W2PR75 194 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 LRRD1A4D1F6 860 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 ZNF487B1APH4 448 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 DUX1O43812 170 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 MMP2P08253 660 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 KDELR1P24390 212 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 MPSTP25325 297 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 CSTF2P33240 577 aaKnown RBP eCLIP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 PPM1FP49593 454 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 IFI35P80217 286 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 ZBTB17Q13105 803 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 TRIM14Q14142 442 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 MESDQ14696 234 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 HENMT1Q5T8I9 393 aaKnown RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 CHST15Q7LFX5 561 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 ZNF761Q86XN6 746 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 PLD5Q8N7P1 536 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 CNTD1Q8N815 330 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 OR8K1Q8NGG5 319 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 TAAR9Q96RI9 348 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 DNAJC7Q99615 494 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 DDA1Q9BW61 102 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 STN1Q9H668 368 aaKnown RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 RMI1Q9H9A7 625 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 ZNHIT6Q9NWK9 470 aaKnown RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 TMEM9Q9P0T7 183 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 CNOT6Q9ULM6 557 aaKnown RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 PRKAB1Q9Y478 270 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 HEY1Q9Y5J3 304 aa14.81□□□□□ -0.04
LRRC28-213ENST00000559399 PCYT1BQ9Y5K3 369 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 OAS3Q9Y6K5 1087 aaKnown RBP14.81□□□□□ -0.04
LRRC28-213ENST00000559399 LRRK1Q38SD2 2015 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 TRBV23OR9-2A0A075B6M9 112 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 FADS2P1A8MWK0 482 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 ANKRD66B4E2M5 251 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 AKR1B10O60218 316 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 EML2O95834 649 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 ACP5P13686 325 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 ATP1A2P50993 1020 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 HHEXQ03014 270 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 GALNT3Q14435 633 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 ASTE1Q2TB18 679 aaPredicted RBP14.8□□□□□ -0.04
LRRC28-213ENST00000559399 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.8□□□□□ -0.04
LRRC28-213ENST00000559399 TMEM71Q6P5X7 295 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 XKR5Q6UX68 686 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 VSIG1Q86XK7 387 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 PMEPA1Q969W9 287 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 WDR24Q96S15 920 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 ARHGAP9Q9BRR9 750 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 SARS2Q9NP81 518 aaKnown RBP14.8□□□□□ -0.04
LRRC28-213ENST00000559399 TBC1D29Q9UFV1 150 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 KCNK6Q9Y257 313 aa14.8□□□□□ -0.04
LRRC28-213ENST00000559399 ANKRD36A6QL64 1941 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 APOL1O14791 398 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 CBFA2T2O43439 604 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 SLC2A4P14672 509 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 WT1P19544 449 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-213ENST00000559399 AP1B1Q10567 949 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 NFATC2Q13469 925 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 PDK1Q15118 436 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 LINC00303Q3SY05 128 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 ZNF569Q5MCW4 686 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 SLC9A4Q6AI14 798 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 LYSMD3Q7Z3D4 306 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 FAM129CQ86XR2 697 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 PHYKPLQ8IUZ5 450 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 EXD3Q8N9H8 876 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 SLC35G2Q8TBE7 412 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 JPH3Q8WXH2 748 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-213ENST00000559399 EXTL1Q92935 676 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 ART4Q93070 314 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 SH3KBP1Q96B97 665 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 MAK16Q9BXY0 300 aaKnown RBP14.79□□□□□ -0.04
LRRC28-213ENST00000559399 CEP41Q9BYV8 373 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 ASPSCR1Q9BZE9 553 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 CARD9Q9H257 536 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 ZFYVE1Q9HBF4 777 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 SLC39A1Q9NY26 324 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 PDP2Q9P2J9 529 aa14.79□□□□□ -0.04
LRRC28-213ENST00000559399 HELZ2Q9BYK8 2649 aaKnown RBP14.79□□□□□ -0.04
LRRC28-213ENST00000559399 KIR2DS5A0A0G2JLQ3 304 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 A0A0G2JNG1 304 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 A6NCN8 305 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 C3orf70A6NLC5 250 aaPredicted RBP14.78□□□□□ -0.04
LRRC28-213ENST00000559399 EFCAB7A8K855 629 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 B4E171 279 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 KIR2DS3K7RE56 304 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 PPP1R12AO14974 1030 aaPredicted RBP14.78□□□□□ -0.04
LRRC28-213ENST00000559399 NUAK1O60285 661 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 SNX2O60749 519 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 SLC4A1P02730 911 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 KRT1P04264 644 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms