RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
TPM1-219ENST00000559397 ZFR2Q9UPR6 939 aaKnown RBP16.47■□□□□ 0.23
TPM1-219ENST00000559397 DMDP11532 3685 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 SCN8AQ9UQD0 1980 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 BPTFQ12830 3046 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 NEMP1O14524 444 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 COPEO14579 308 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 FAM107AO95990 144 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 C1SP09871 688 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 DHRS4L1P0CG22 281 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ZNF30P17039 623 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 GM2AP17900 193 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 GABRB3P28472 473 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 CRHR1P34998 444 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ETV4P43268 484 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 LIG3P49916 1009 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 STC1P52823 247 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 IL9RQ01113 521 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TAF1AQ15573 450 aaPredicted RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 NEK5Q6P3R8 708 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 KIAA0408Q6ZU52 694 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 LONP2Q86WA8 852 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ZC3HC1Q86WB0 502 aaKnown RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 DCLK2Q8N568 766 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 C2CD4AQ8NCU7 369 aaPredicted RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 STYXQ8WUJ0 223 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 C1QTNF1Q9BXJ1 281 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 RHOJQ9H4E5 214 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 KCTD3Q9Y597 815 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ARL5AQ9Y689 179 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TRPM6Q9BX84 2022 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 WDFY4Q6ZS81 3184 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3DA0A087WVF3 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3IA0A087WXS9 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3EA0A087X179 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3KA0A087X1G2 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3FA6NER0 549 aaPredicted RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3LB9A6J9 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 PSMD11O00231 422 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TPP1O14773 563 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 MMP20O60882 483 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 PCDH8O95206 1070 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 SEMA4FO95754 770 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 AHSGP02765 367 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3HP0C7X1 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 DRD4P21917 467 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 HMGCLP35914 325 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 HADHAP40939 763 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ARSDP51689 593 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 CREB5Q02930 508 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 THOC5Q13769 683 aaKnown RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 ARHGEF7Q14155 803 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ZNF528Q3MIS6 628 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 USP39Q53GS9 565 aaKnown RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3GQ6DHY5 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3CQ6IPX1 549 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 LVRNQ6Q4G3 990 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 RGS9BPQ6ZS82 235 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 CDHR3Q6ZTQ4 885 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 HSD11B1LQ7Z5J1 315 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 GALNT7Q86SF2 657 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 TBC1D3Q8IZP1 549 aaPredicted RBP16.46■□□□□ 0.23
TPM1-219ENST00000559397 GDAP1Q8TB36 358 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 CALML6Q8TD86 181 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 CXorf40AQ8TE69 158 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 VPS39Q96JC1 886 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 GPR22Q99680 433 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 GPR63Q9BZJ6 419 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 SLC17A7Q9P2U7 560 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 GRID1Q9ULK0 1009 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 INVSQ9Y283 1065 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 PLLPQ9Y342 182 aa16.46■□□□□ 0.23
TPM1-219ENST00000559397 ZNF318Q5VUA4 2279 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 A0A1W2PQU0 124 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 LRRC72A6NJI9 287 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 RNGTTO60942 597 aaKnown RBP16.45■□□□□ 0.22
TPM1-219ENST00000559397 CRTAMO95727 393 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 ELFN1P0C7U0 828 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 C6P13671 934 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 FOXN2P32314 431 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 CSRP3P50461 194 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 ZNF140P52738 457 aaPredicted RBP16.45■□□□□ 0.22
TPM1-219ENST00000559397 NUBP1P53384 320 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 PPP2CBP62714 309 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 PPP2CAP67775 309 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 PDE1BQ01064 536 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 ANGPT1Q15389 498 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 TMEM259Q4ZIN3 620 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 HHATQ5VTY9 493 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 SEL1L3Q68CR1 1132 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 KIAA1161Q6NSJ0 714 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 TECPR1Q7Z6L1 1165 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 DENND6AQ8IWF6 608 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 LMNTD2Q8IXW0 634 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 HDAC10Q969S8 669 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 COQ10AQ96MF6 247 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 FAM126AQ9BYI3 521 aaPredicted RBP16.45■□□□□ 0.22
TPM1-219ENST00000559397 C6orf106Q9H6K1 298 aaPredicted RBP16.45■□□□□ 0.22
TPM1-219ENST00000559397 IL17CQ9P0M4 197 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms