RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ZNF783Q6ZMS7 281 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 LRRC69Q6ZNQ3 347 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 GPR155Q7Z3F1 870 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 PCGF5Q86SE9 256 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SDCCAG8Q86SQ7 713 aaPredicted RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 CCDC25Q86WR0 208 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 FAM131BQ86XD5 332 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 ZDHHC17Q8IUH5 632 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 KATNAL2Q8IYT4 538 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 RBFAQ8N0V3 343 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 PCDH20Q8N6Y1 951 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 EMC1Q8N766 993 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 TMEM35BQ8NCS4 154 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 LSM14AQ8ND56 463 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 OR6K2Q8NGY2 324 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 EXD1Q8NHP7 514 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 LRRC8CQ8TDW0 803 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 DENND1AQ8TEH3 1009 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SLC20A1Q8WUM9 679 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SNRNP27Q8WVK2 155 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 DNAJC9Q8WXX5 260 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 MAML1Q92585 1016 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 FUBP1Q96AE4 644 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 ZNF653Q96CK0 615 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 RMDN2Q96LZ7 410 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 LENG8Q96PV6 779 aaPredicted RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 NR1H4Q96RI1 486 aaPredicted RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 HAPLN3Q96S86 360 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SMC6Q96SB8 1091 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 TSC22D3Q99576 134 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 HEPHQ9BQS7 1158 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 NUP85Q9BW27 656 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SEMA4CQ9C0C4 833 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 ZYG11BQ9C0D3 744 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 OSBPL2Q9H1P3 480 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 NOL6Q9H6R4 1146 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 CPNE5Q9HCH3 593 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 MRPL47Q9HD33 250 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 DNAJC28Q9NX36 388 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 TAS2R14Q9NYV8 317 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 IL1RAPL1Q9NZN1 696 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 PPARGC1AQ9UBK2 798 aaKnown RBP5.89□□□□□ -1.47
USP3-212ENST00000559276 PHTF1Q9UMS5 762 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 NEU2Q9Y3R4 380 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SCINQ9Y6U3 715 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 ZNF462Q96JM2 2506 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 KIF26BQ2KJY2 2108 aa5.89□□□□□ -1.47
USP3-212ENST00000559276 SCN8AQ9UQD0 1980 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CXorf51AA0A1B0GTR3 108 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 TEX51A0A1B0GUA7 166 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 EXOC1LA0A1B0GW35 172 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 EME2A4GXA9 379 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 CYSRT1A8MQ03 144 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 F8W8V4 182 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 GOLGA8SH3BPF8 625 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 NVLO15381 856 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 EFSO43281 561 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 USP12O75317 370 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 SPAG6O75602 509 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PROSCO94903 275 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 F9P00740 461 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CYP1A1P04798 512 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 LINGO3P0C6S8 592 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PHBP35232 272 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ADRA1BP35368 520 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 IGFALSP35858 605 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 MARCKSL1P49006 195 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 RPL26P61254 145 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 HNRNPKP61978 463 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP3-212ENST00000559276 RPS21P63220 83 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 CXADRP78310 365 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 GABREP78334 506 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 MXRA7P84157 204 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 FMO1Q01740 532 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 NRG1Q02297 640 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 LRRC14Q15048 493 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 TBCCQ15814 346 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CDKN3Q16667 212 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ISXQ2M1V0 245 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 C15orf59Q2T9L4 293 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 KLHL38Q2WGJ6 581 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 DEFB133Q30KQ1 61 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CCDC14Q49A88 953 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 LRRC73Q5JTD7 316 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 KIAA1161Q6NSJ0 714 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CGB2Q6NT52 195 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 RETSATQ6NUM9 610 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 IGF2-ASQ6U949 168 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ARCQ7LC44 396 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PTAR1Q7Z6K3 402 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 PARGQ86W56 976 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 DCP2Q8IU60 420 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms