RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, human

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG21-208	ENST00000558943	SLC9A1	P19634	815 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	ITIH1	P19827	911 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	NR4A1	P22736	598 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	AKT2	P31751	481 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	PDX1	P52945	283 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	COPB1	P53618	953 aa	Known RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	TNNC1	P63316	161 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	BLOC1S1	P78537	153 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	GTF2B	Q00403	316 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	DRAP1	Q14919	205 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	DEFB133	Q30KQ1	61 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	DEFB109B	Q30KR1	87 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	C9orf64	Q5T6V5	341 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	NUGGC	Q68CJ6	796 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943		Q6ZSR6	202 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	ESPNL	Q6ZVH7	1005 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	TRIM69	Q86WT6	500 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	MCEMP1	Q8IX19	187 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	AADAT	Q8N5Z0	425 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	LMX1A	Q8TE12	382 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	SMARCD1	Q96GM5	515 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	CDK5RAP3	Q96JB5	506 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	TNIP3	Q96KP6	325 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	PPP1R13B	Q96KQ4	1090 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	C5orf34	Q96MH7	638 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	HAPLN3	Q96S86	360 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	PLIN2	Q99541	437 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	CGRRF1	Q99675	332 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	MYOC	Q99972	504 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	MLST8	Q9BVC4	326 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	MTMR12	Q9C0I1	747 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	INTS2	Q9H0H0	1204 aa	Known RBP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	DPEP3	Q9H4B8	488 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	PARVG	Q9HBI0	331 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	OSER1	Q9NX31	292 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	FOXJ2	Q9P0K8	574 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	SIX4	Q9UIU6	781 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	RASAL2	Q9UJF2	1139 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	ODF2L	Q9ULJ1	636 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	SCML2	Q9UQR0	700 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	TP53TG5	Q9Y2B4	290 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	CEP83	Q9Y592	693 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	STYXL1	Q9Y6J8	313 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	MYLK	Q15746	1914 aa		4.87	□□□□□ -1.63
SPG21-208	ENST00000558943	TRIP11	Q15643	1979 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	PDZD2	O15018	2839 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	EDDM13	A0A1B0GTR0	161 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	TMEM200C	A6NKL6	621 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ZAR1L	A6NP61	321 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	PP2D1	A8MPX8	630 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	C10orf142	B7Z368	130 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	NTN3	O00634	580 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	TBCA	O75347	108 aa	Known RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	SEC24D	O94855	1032 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	SCAF4	O95104	1147 aa	Known RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	CSF2	P04141	144 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	RPLP0	P05388	317 aa	Known RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ANXA6	P08133	673 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	PRKAR1A	P10644	381 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	LIF	P15018	202 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	PRLR	P16471	622 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF18	P17022	549 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	CCKBR	P32239	447 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	NNMT	P40261	264 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	AVPR1B	P47901	424 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ADK	P55263	362 aa	Known RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	MAP3K7CL	P57077	242 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	CCL7	P80098	99 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	MC1R	Q01726	317 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	CCDC15	Q0P6D6	951 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	MRPL49	Q13405	166 aa	Known RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF460	Q14592	562 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	HECTD2	Q5U5R9	776 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	FAM46C	Q5VWP2	391 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	RNF219	Q5W0B1	726 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	SP5	Q6BEB4	398 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	KCNK18	Q7Z418	384 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	BRSK2	Q8IWQ3	736 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	CCDC13	Q8IYE1	715 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	STK40	Q8N2I9	435 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF557	Q8N988	423 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	KDM1B	Q8NB78	822 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	KLK6	Q92876	244 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	SAAL1	Q96ER3	474 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF764	Q96H86	408 aa	Predicted RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	COQ10A	Q96MF6	247 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	REEP2	Q9BRK0	252 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	NDC1	Q9BTX1	674 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	EFHD1	Q9BUP0	239 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	SLC29A3	Q9BZD2	475 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	UNK	Q9C0B0	810 aa	Known RBP	4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	B3GNT4	Q9C0J1	378 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms