RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 COX14Q96I36 57 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 HIC2Q96JB3 615 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 ELF4Q99607 663 aaPredicted RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 C19orf43Q9BQ61 176 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 SUDS3Q9H7L9 328 aaPredicted RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 L2HGDHQ9H9P8 463 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 ARFGAP3Q9NP61 516 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 DNAJC28Q9NX36 388 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 WHRNQ9P202 907 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 APPL1Q9UKG1 709 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 CNOT6Q9ULM6 557 aaKnown RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 PNMA8BQ9ULN7 279 aaPredicted RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 DMXL1Q9Y485 3027 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 CABIN1Q9Y6J0 2220 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 SMAPO00193 183 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 NDC80O14777 642 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 TP73O15350 636 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 GDF9O60383 454 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 FOXD2O60548 495 aaPredicted RBP17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A9O60656 530 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 BANF1O75531 89 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 SRP72O76094 671 aaKnown RBP17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A6P19224 532 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A1P22309 533 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A4P22310 534 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 KELP23276 732 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 CA5AP35218 305 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A3P35503 534 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A5P35504 534 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 ARSDP51689 593 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 IL9RQ01113 521 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 CALCOCO2Q13137 446 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 ITGA9Q13797 1035 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 SKIDA1Q1XH10 827 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 FNBP1LQ5T0N5 605 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 KCTD16Q68DU8 428 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 NLRP9Q7RTR0 991 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 AGGF1Q8N302 714 aaeCLIP17.31■□□□□ 0.36
TPM1-214ENST00000558544 OXR1Q8N573 874 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 BBOF1Q8ND07 529 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 LRRN4CLQ8ND94 238 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 OR56A4Q8NGH8 313 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 GLYATL1Q969I3 302 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 TSACCQ96A04 125 aaPredicted RBP17.31■□□□□ 0.36
TPM1-214ENST00000558544 PDXPQ96GD0 296 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 CDKN2AIPNLQ96HQ2 116 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 TBATAQ96M53 351 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 PWWP2AQ96N64 755 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 ERVMER34-1Q9H9K5 563 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A7Q9HAW7 530 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A10Q9HAW8 530 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 UGT1A8Q9HAW9 530 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 MRM3Q9HC36 420 aaKnown RBP17.31■□□□□ 0.36
TPM1-214ENST00000558544 FGF22Q9HCT0 170 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 TMEM9BQ9NQ34 198 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 GRHL1Q9NZI5 618 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 KLQ9UEF7 1012 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 MOSPD1Q9UJG1 213 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 TMPRSS11EQ9UL52 423 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 RIMKLBQ9ULI2 386 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 SOX13Q9UN79 622 aa17.31■□□□□ 0.36
TPM1-214ENST00000558544 OAS3Q9Y6K5 1087 aaKnown RBP17.31■□□□□ 0.36
TPM1-214ENST00000558544 ASCC3Q8N3C0 2202 aaKnown RBP17.31■□□□□ 0.36
TPM1-214ENST00000558544 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 SDR42E2A6NKP2 422 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 H7C0S8 307 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 CDX4O14627 284 aaPredicted RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 ASMTLO95671 621 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 NMBRP28336 390 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 DHX9Q08211 1270 aaKnown RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 TRADDQ15628 312 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 MSS51Q4VC12 460 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 ZNF648Q5T619 568 aaPredicted RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 CES3Q6UWW8 571 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 PHYKPLQ8IUZ5 450 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 ZNF398Q8TD17 642 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 DTX3LQ8TDB6 740 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 PTCD2Q8WV60 388 aaKnown RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 BTN2A2Q8WVV5 523 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 OR1E3Q8WZA6 343 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 PEX13Q92968 403 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 VPS35Q96QK1 796 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 TRIM56Q9BRZ2 755 aaKnown RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 KIFC1Q9BW19 673 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 FRMD8Q9BZ67 464 aaPredicted RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 FAM96AQ9H5X1 160 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 ASB8Q9H765 288 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 MRPL40Q9NQ50 206 aaKnown RBP17.3■□□□□ 0.36
TPM1-214ENST00000558544 SAMD15Q9P1V8 674 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 KLF15Q9UIH9 416 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 TMEM98Q9Y2Y6 226 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 SLC30A1Q9Y6M5 507 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 PIKFYVEQ9Y2I7 2098 aa17.3■□□□□ 0.36
TPM1-214ENST00000558544 A0A1B0GTQ1 180 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 CCDC162PA2VCL2 907 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 OR51F1A6NGY5 319 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 SDC3O75056 442 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 SLC25A14O95258 325 aaPredicted RBP17.29■□□□□ 0.36
TPM1-214ENST00000558544 PRSS56P0CW18 603 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms