RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 KYQ8NBH2 561 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 TP53I13Q8NBR0 393 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 CCDC74AQ96AQ1 378 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 OLFM3Q96PB7 478 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 FOXP3Q9BZS1 431 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 SLC13A1Q9BZW2 595 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 SIRPGQ9P1W8 387 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 WHRNQ9P202 907 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 ATP8A1Q9Y2Q0 1164 aa11.2□□□□□ -0.62
RABGGTA-204ENST00000558376 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 MAP2K7O14733 419 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 TIMP2P16035 220 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ITGB6P18564 788 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 STIP1P31948 543 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 YPEL5P62699 121 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 PPARDQ03181 441 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 HP1BP3Q5SSJ5 553 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ATXN7L2Q5T6C5 722 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ANKRD22Q5VYY1 191 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ESRP1Q6NXG1 681 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 MACC1Q6ZN28 852 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 USP53Q70EK8 1073 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 TTC7BQ86TV6 843 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 SDR16C5Q8N3Y7 309 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 EXTL1Q92935 676 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ARHGEF2Q92974 986 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 CAVIN3Q969G5 261 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 TSACCQ96A04 125 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 SGF29Q96ES7 293 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 FMO2Q99518 471 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 FRMD8P1Q9BZ68 369 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 FAM117AQ9C073 453 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 KLC2Q9H0B6 622 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 STARD5Q9NSY2 213 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 SEPT10Q9P0V9 454 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 PPARGC1AQ9UBK2 798 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 BSNQ9UPA5 3926 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 KCNK1O00180 336 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 POP4O95707 220 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 GSRP00390 522 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 IRF4Q15306 451 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ALG11Q2TAA5 492 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 MANEALQ5VSG8 457 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 GDPD4Q6W3E5 623 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 OR2AP1Q8NGE2 309 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 GFM1Q96RP9 751 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 HPCAL4Q9UM19 191 aa11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 HEMK1Q9Y5R4 338 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-204ENST00000558376 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 AGRPO00253 132 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 DFFAO00273 331 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 DNALI1O14645 258 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 TM7SF2O76062 418 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 METTL18O95568 372 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 RPLP0P05388 317 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 WT1P19544 449 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 HK3P52790 923 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 INHBCP55103 352 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 SNRPD1P62314 119 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 UAP1Q16222 522 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 WSCD2Q2TBF2 565 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 XKR5Q6UX68 686 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 TMC3Q7Z5M5 1100 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 NLRP14Q86W24 1093 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 HID1Q8IV36 788 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 FSTL5Q8N475 847 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 EIF1ADQ8N9N8 165 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 UHMK1Q8TAS1 419 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 HTR3CQ8WXA8 447 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 CPT1BQ92523 772 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 TBC1D31Q96DN5 1066 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 WRAP53Q9BUR4 548 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 CPEB1Q9BZB8 566 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 SLC39A8Q9C0K1 460 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 LRRN3Q9H3W5 708 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 PCDH9Q9HC56 1237 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 PISDQ9UG56 409 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 ACSL6Q9UKU0 697 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 GPR34Q9UPC5 381 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 DOLKQ9UPQ8 538 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 COQ6Q9Y2Z9 468 aa11.18□□□□□ -0.62
RABGGTA-204ENST00000558376 CXorf51AA0A1B0GTR3 108 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 D6RAR5 112 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 BANF1O75531 89 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 FAM87AP0C7U9 286 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 HSD17B3P37058 310 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ETV5P41161 510 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 BASP1P80723 227 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■□□□□ 9.3
RABGGTA-204ENST00000558376 EIF3IQ13347 325 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms