RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PRDM8Q9NQV8 689 aa6.14□□□□□ -1.43
RTF1-204ENST00000558117 TMEM184CQ9NVA4 438 aa6.14□□□□□ -1.43
RTF1-204ENST00000558117 ZNF69Q9UC07 566 aa6.14□□□□□ -1.43
RTF1-204ENST00000558117 NIPBLQ6KC79 2804 aaeCLIP6.13□□□□□ -1.436e-6■■■□□ 16.7
RTF1-204ENST00000558117 SLC22A23A1A5C7 686 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 MBLAC1A4D2B0 266 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 ECI2O75521 394 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 GGPS1O95749 300 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 ENO1P06733 434 aaKnown RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 CD59P13987 128 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 TNFRSF8P28908 595 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 MAN1A1P33908 653 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 CPA2P48052 419 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 SOX2P48431 317 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 SLC12A2P55011 1212 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 SLC37A1P57057 533 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 AP2B1P63010 937 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 IKQ13123 557 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 STXBP2Q15833 593 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 EARS2Q5JPH6 523 aaKnown RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 ZNF569Q5MCW4 686 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 TTC39AQ5SRH9 613 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 MARCH8Q5T0T0 291 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 ATPAF1Q5TC12 328 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 PAPD7Q5XG87 772 aaKnown RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 DHRS13Q6UX07 377 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 FAM43BQ6ZT52 329 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 RHPN2Q8IUC4 686 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 CCDC117Q8IWD4 279 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 PAF1Q8N7H5 531 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 C16orf52Q8NHV5 167 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 IGSF21Q96ID5 467 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 CAMK1GQ96NX5 476 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 MTMR4Q9NYA4 1195 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 LUZP4Q9P127 313 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 NFU1Q9UMS0 254 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 TRPV2Q9Y5S1 764 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 SCINQ9Y6U3 715 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 MUC22E2RYF6 1773 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 KIF26AQ9ULI4 1882 aaPredicted RBP6.13□□□□□ -1.43
RTF1-204ENST00000558117 AKAP9Q99996 3911 aa6.13□□□□□ -1.43
RTF1-204ENST00000558117 C2CD4BA6NLJ0 364 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 PRKAB2O43741 272 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 RPS6KB1P23443 525 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 PTPRBP23467 1997 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 MCCP23508 829 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 GRK5P34947 590 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 TAS2R50P59544 299 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 NTHL1P78549 312 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 TLE3Q04726 772 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 CLLU1OSQ5K130 101 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 CRYBG3Q68DQ2 2970 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 ZNF793Q6ZN11 406 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 ANKHD1Q8IWZ3 2542 aaKnown RBP6.12□□□□□ -1.43
RTF1-204ENST00000558117 MYCT1Q8N699 235 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 SRFBP1Q8NEF9 429 aaKnown RBP6.12□□□□□ -1.43
RTF1-204ENST00000558117 ITFG1Q8TB96 612 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 OTUD7AQ8TE49 926 aaPredicted RBP6.12□□□□□ -1.43
RTF1-204ENST00000558117 WIPF2Q8TF74 440 aaPredicted RBP6.12□□□□□ -1.43
RTF1-204ENST00000558117 CLEC4CQ8WTT0 213 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 HDAC7Q8WUI4 952 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 HMCESQ96FZ2 354 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 TAAR1Q96RJ0 339 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 TMEM79Q9BSE2 394 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 BRD8Q9H0E9 1235 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 SEPSECSQ9HD40 501 aaKnown RBP6.12□□□□□ -1.43
RTF1-204ENST00000558117 TRPV5Q9NQA5 729 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 ZDHHC7Q9NXF8 308 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 ISY1Q9ULR0 285 aaKnown RBP6.12□□□□□ -1.43
RTF1-204ENST00000558117 PIAS3Q9Y6X2 628 aa6.12□□□□□ -1.43
RTF1-204ENST00000558117 KNTC1P50748 2209 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 DOCK6Q96HP0 2047 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 KDM3AQ9Y4C1 1321 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 DENND3A2RUS2 1198 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 SOCS2O14508 198 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 TEX28O15482 410 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 RRP8O43159 456 aaKnown RBP6.11□□□□□ -1.43
RTF1-204ENST00000558117 LARGE1O95461 756 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 GLUD1P00367 558 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 CYP3A4P08684 503 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 UBA1P22314 1058 aaKnown RBP6.11□□□□□ -1.43
RTF1-204ENST00000558117 CCNE1P24864 410 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 SLC1A4P43007 532 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 RNASELQ05823 741 aaKnown RBP6.11□□□□□ -1.43
RTF1-204ENST00000558117 FOXO1Q12778 655 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 G3BP1Q13283 466 aaKnown RBP eCLIP6.11□□□□□ -1.43
RTF1-204ENST00000558117 RBMS2Q15434 407 aaKnown RBP6.11□□□□□ -1.43
RTF1-204ENST00000558117 ANXA2RQ3ZCQ2 193 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 C10orf25Q5T742 122 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 PMS2CLQ68D20 193 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 TANGO2Q6ICL3 276 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 JMJD6Q6NYC1 403 aaPredicted RBP6.11□□□□□ -1.43
RTF1-204ENST00000558117 DEF8Q6ZN54 512 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 RRAGAQ7L523 313 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 TICAM1Q8IUC6 712 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 SMAP1Q8IYB5 467 aaPredicted RBP6.11□□□□□ -1.43
RTF1-204ENST00000558117 COQ8BQ96D53 544 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 ZBTB10Q96DT7 871 aa6.11□□□□□ -1.43
RTF1-204ENST00000558117 HERPUD2Q9BSE4 406 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms