RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RHOBTB1O94844 696 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 SBK3P0C264 359 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 CYP2A6P11509 494 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 CTHP32929 405 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 MLLT1Q03111 559 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 RALGDSQ12967 914 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 ATP13A5Q4VNC0 1218 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 RNF187Q5TA31 235 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 Q6ZVL8 140 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 CBARPQ8N350 705 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 SCAMP4Q969E2 229 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 WRAP53Q9BUR4 548 aaKnown RBP20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 XPR1Q9UBH6 696 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 CRLS1Q9UJA2 301 aa20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 CORO1CQ9ULV4 474 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-205ENST00000558036 SPECC1L-ADORA2AF8WAN1 911 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 G3V2L1 256 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SPINT1O43278 529 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 CPA3P15088 417 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 PSMD8P48556 350 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 OVGP1Q12889 678 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SETMARQ53H47 684 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 LRRC8EQ6NSJ5 796 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 OTOAQ7RTW8 1153 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 CLDN19Q8N6F1 224 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 TMIEQ8NEW7 156 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 NSRP1Q9H0G5 558 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SCN8AQ9UQD0 1980 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 COL6A3P12111 3177 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 BIRC5O15392 142 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 EDF1O60869 148 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 WISP3O95389 354 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 COL6A2P12110 1019 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 MMP12P39900 470 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 PTGER3P43115 390 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 BST1Q10588 318 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 PREPLQ4J6C6 727 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 C2orf27AQ580R0 203 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 GKAP1Q5VSY0 366 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 FBXL19Q6PCT2 694 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 NUDT18Q6ZVK8 323 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SLC44A3Q8N4M1 653 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SGF29Q96ES7 293 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SEC16BQ96JE7 1060 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 UBXN10Q96LJ8 280 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 SLC30A3Q99726 388 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 ACSS2Q9NR19 701 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 VPS9D1Q9Y2B5 631 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 STARD13Q9Y3M8 1113 aa20.27■□□□□ 0.84
SNRPA1-205ENST00000558036 PFDN6O15212 129 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PKMP14618 531 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 ZNF30P17039 623 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 ITGB7P26010 798 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 ACRV1P26436 265 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PDAP1Q13442 181 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 DPPA4Q7L190 304 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PIGWQ7Z7B1 504 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 MOCOSQ96EN8 888 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 GPR21Q99679 349 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 C19orf43Q9BQ61 176 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 TSSK1BQ9BXA7 367 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 C20orf27Q9GZN8 174 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 P2RY12Q9H244 342 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PIAS3Q9Y6X2 628 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 TRBV5-4A0A0C4DH59 114 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 FGF3P11487 239 aaPredicted RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 KIR2DL1P43626 348 aaPredicted RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 SMAD4Q13485 552 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PON2Q15165 354 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 FAM83EQ2M2I3 478 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 ERAP2Q6P179 960 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PAQR3Q6TCH7 311 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 CERS6Q6ZMG9 384 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 SIDT2Q8NBJ9 832 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PPP1R14CQ8TAE6 165 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 HCAR2Q8TDS4 363 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 SCG3Q8WXD2 468 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 SARS2Q9NP81 518 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 TAS2R13Q9NYV9 303 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 PRSS21Q9Y6M0 314 aa20.26■□□□□ 0.83
SNRPA1-205ENST00000558036 F5P12259 2224 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 SNX3O60493 162 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 LTA4HP09960 611 aaKnown RBP20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 ELFN1P0C7U0 828 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 ZNF37AP17032 561 aaPredicted RBP20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 SUOXP51687 545 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 ITGA9Q13797 1035 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 NXPE1Q8N323 547 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 PLEKHG4BQ96PX9 1271 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 CDX2Q99626 313 aaPredicted RBP20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 SPATA16Q9BXB7 569 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 PKD2L2Q9NZM6 624 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 COQ6Q9Y2Z9 468 aa20.25■□□□□ 0.83
SNRPA1-205ENST00000558036 PRMT5O14744 637 aaPredicted RBP20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 EGFP01133 1207 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 ADRB3P13945 408 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 HNRNPLP14866 589 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 CHRM3P20309 590 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms