RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GPR39O43194 453 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 PGAM1P18669 254 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 ITGALP20701 1170 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 PSMA3P25788 255 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 HTR1BP28222 390 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 CARSP49589 748 aaKnown RBP21.11■□□□□ 0.97
CASC4-204ENST00000557945 TUBB4BP68371 445 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 ACVR1Q04771 509 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 SPEM2Q0P670 501 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 CUL1Q13616 776 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 NFATC4Q14934 902 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 ANKRD20A4Q4UJ75 823 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 PLA2G2CQ5R387 149 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 SLC23A3Q6PIS1 610 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 TRIM74Q86UV6 250 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 DCP2Q8IU60 420 aaKnown RBP21.11■□□□□ 0.97
CASC4-204ENST00000557945 IGDCC3Q8IVU1 814 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 SLC22A18ASQ8N1D0 253 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 GDAP1Q8TB36 358 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 DTX3LQ8TDB6 740 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 GLYATL1Q969I3 302 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 LRRC39Q96DD0 335 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 CFAP36Q96G28 342 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 NAT9Q9BTE0 207 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 LGR4Q9BXB1 951 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 NUSAP1Q9BXS6 441 aaKnown RBP21.11■□□□□ 0.97
CASC4-204ENST00000557945 FAM129AQ9BZQ8 928 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 FOXP3Q9BZS1 431 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 FAM96AQ9H5X1 160 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 MTRF1LQ9UGC7 380 aaKnown RBP21.11■□□□□ 0.97
CASC4-204ENST00000557945 CRLS1Q9UJA2 301 aa21.11■□□□□ 0.97
CASC4-204ENST00000557945 CNOT6Q9ULM6 557 aaKnown RBP21.11■□□□□ 0.97
CASC4-204ENST00000557945 OR51F1A6NGY5 319 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 E7ESA3 106 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 SLC25A14O95258 325 aaPredicted RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 GOT2P00505 430 aaKnown RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 MYCLP1P12525 358 aaPredicted RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 PAMP19021 973 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 NXPH1P58417 271 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 KIAA1024LP59773 190 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 NFATC2Q13469 925 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 PTK2BQ14289 1009 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 KIF19Q2TAC6 998 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 TPRG1LQ5T0D9 272 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 TCEAL6Q6IPX3 200 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 DOK6Q6PKX4 331 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 AFTPHQ6ULP2 937 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 ENPP7Q6UWV6 458 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 TAS2R42Q7RTR8 314 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 ZBED8Q8IZ13 594 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 BTN2A2Q8WVV5 523 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 TCEAL3Q969E4 200 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 CAPN10Q9HC96 672 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 ARFGAP3Q9NP61 516 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 ZC3H7BQ9UGR2 993 aaKnown RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 SNX11Q9Y5W9 270 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 TEX264Q9Y6I9 313 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 EIF3HO15372 352 aaKnown RBP eCLIP21.1■□□□□ 0.976e-8■□□□□ 9.5
CASC4-204ENST00000557945 USP1O94782 785 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 VAPBO95292 243 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 POLBP06746 335 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 HOXC4P09017 264 aaPredicted RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 KELP23276 732 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 IRX4P78413 519 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 CACNG1Q06432 222 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 FASTKD3Q14CZ7 662 aaKnown RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 SMAD1Q15797 465 aaKnown RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 SNX20Q7Z614 316 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 TMEM135Q86UB9 458 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 SPATS2Q86XZ4 545 aaKnown RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 PHYKPLQ8IUZ5 450 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 CCNJLQ8IV13 435 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 FBXO36Q8NEA4 188 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 UBXN4Q92575 508 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 RUBCNQ92622 972 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 WDR92Q96MX6 357 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 FCRL3Q96P31 734 aaPredicted RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 VPS35Q96QK1 796 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.1■□□□□ 0.97
CASC4-204ENST00000557945 TMPRSS11EQ9UL52 423 aa21.1■□□□□ 0.97
CASC4-204ENST00000557945 V9GYY5 206 aaPredicted RBP21.1■□□□□ 0.97
CASC4-204ENST00000557945 SPTY2D1-AS1A0A0U1RR47 76 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 ASMTLO95671 621 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 SYPP08247 313 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 PRSS56P0CW18 603 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 PI4KAP42356 2102 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 BNC1Q01954 994 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 GRIK2Q13002 908 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 KIAA0930Q6ICG6 404 aaPredicted RBP21.09■□□□□ 0.97
CASC4-204ENST00000557945 MACC1Q6ZN28 852 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 OTUD6BQ8N6M0 293 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.09■□□□□ 0.97
CASC4-204ENST00000557945 OR4L1Q8NH43 312 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 PYROXD1Q8WU10 500 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 COX14Q96I36 57 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 FMO2Q99518 471 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 WDR83Q9BRX9 315 aaKnown RBP21.09■□□□□ 0.97
CASC4-204ENST00000557945 GPR27Q9NS67 375 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 MOSPD1Q9UJG1 213 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 NFU1Q9UMS0 254 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms