RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ELOA3Q8NG57 546 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 OR56A4Q8NGH8 313 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 KIAA1524Q8TCG1 905 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 GPBAR1Q8TDU6 330 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ART4Q93070 314 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 MIB2Q96AX9 1013 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 C18orf8Q96DM3 657 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 HMCESQ96FZ2 354 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 EXOC2Q96KP1 924 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 FAM81BQ96LP2 452 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 CATSPER2Q96P56 530 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 NCAPGQ9BPX3 1015 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 SPATA9Q9BWV2 254 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 LGR4Q9BXB1 951 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 MAGEB5Q9BZ81 275 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 CYP4F12Q9HCS2 524 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 SIX2Q9NPC8 291 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 SPATS2LQ9NUQ6 558 aaKnown RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM51Q9NW97 253 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM248Q9NWD8 314 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 LUZP4Q9P127 313 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 LHX3Q9UBR4 397 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 MFHAS1Q9Y4C4 1052 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PCDHGA3Q9Y5H0 932 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ATP6V1DQ9Y5K8 247 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PRRC2CQ9Y520 2896 aaKnown RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ANKRD17O75179 2603 aaKnown RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 RP1L1Q8IWN7 2480 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PRSS38A1L453 326 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ZSCAN5CA6NGD5 496 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PRR19A6NJB7 356 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 RHPN2P1A8MT19 583 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 VSTM5A8MXK1 200 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CACNB4O00305 520 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 BIN1O00499 593 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 TNFRSF10CO14798 259 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 MTSS1O43312 755 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 BUB1BO60566 1050 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 RAD1O60671 282 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 RFPL1O75677 317 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 RECQL5O94762 991 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ECEL1O95672 775 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 FGF1P05230 155 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PLEKP08567 350 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 IMPDH2P12268 514 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 GM2AP17900 193 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 OAS2P29728 719 aaKnown RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CSF2RBP32927 897 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CHRNA4P43681 627 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CD97P48960 835 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 LIMK2P53671 638 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CDC20Q12834 499 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 RALGDSQ12967 914 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PAK1Q13153 545 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 NR1D2Q14995 579 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SETDB1Q15047 1291 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CDO1Q16878 200 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 EXOC3L4Q17RC7 722 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 C15orf59Q2T9L4 293 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 LACTB2Q53H82 288 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ATP1A1-AS1Q5TC04 95 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 TAF3Q5VWG9 929 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 NKAIN2Q5VXU1 208 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 BRAT1Q6PJG6 821 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 GBP6Q6ZN66 633 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CD163Q86VB7 1156 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 C17orf82Q86X59 251 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 FAM129CQ86XR2 697 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 NRROSQ86YC3 692 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CAMK1DQ8IU85 385 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 FAM71AQ8IYT1 594 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 UNC5BQ8IZJ1 945 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PELI3Q8N2H9 469 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CCDC185Q8N715 623 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM35BQ8NCS4 154 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 AGBL5Q8NDL9 886 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CCDC112Q8NEF3 446 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 OR4D9Q8NGE8 314 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ENOX1Q8TC92 643 aaKnown RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PATE1Q8WXA2 126 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CASKIN2Q8WXE0 1202 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SLC45A3Q96JT2 553 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 TIGD1Q96MW7 591 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 HERPUD2Q9BSE4 406 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SELENOOQ9BVL4 669 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SARGQ9BW04 601 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 DDA1Q9BW61 102 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 RETREG1Q9H6L5 497 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 WDR26Q9H7D7 661 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SUDS3Q9H7L9 328 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 LRRC4CQ9HCJ2 640 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 OCIAD1Q9NX40 245 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SLC39A1Q9NY26 324 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM9Q9P0T7 183 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PLEKHB1Q9UF11 243 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 HOOK1Q9UJC3 728 aaKnown RBP5.85□□□□□ -1.47
VPS33B-207ENST00000557470 MOSPD1Q9UJG1 213 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms