RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ATG14Q6ZNE5 492 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SNX20Q7Z614 316 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 OR4A15Q8NGL6 344 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 OR6Y1Q8NGX8 325 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 BCL2L14Q9BZR8 327 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 FBRSQ9HAH7 460 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MCCC2Q9HCC0 563 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 RASSF1Q9NS23 344 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MAGEL2Q9UJ55 1249 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 TLR6Q9Y2C9 796 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SPIN1Q9Y657 262 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 HDAC3O15379 428 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ADH5P11766 374 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ALAS2P22557 587 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 SLC7A2P52569 658 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 CASP6P55212 293 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 PKNOX1P55347 436 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 SPIRE1Q08AE8 756 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 HNRNPDQ14103 355 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 NUP54Q7Z3B4 507 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 AMZ2Q86W34 360 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 OFCC1Q8IZS5 231 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 KIFC1Q9BW19 673 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 KLHL31Q9H511 634 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FBXO6Q9NRD1 293 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 SERINC1Q9NRX5 453 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 INTS10Q9NVR2 710 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 MYRFQ9Y2G1 1151 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 SALL3Q9BXA9 1300 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 H0YGN5 161 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 BCL10O95999 233 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 CFIP05156 583 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 RHAGQ02094 409 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ELOAQ14241 798 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 POM121L1PQ3SYA9 428 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TCEAL6Q6IPX3 200 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ADGRG6Q86SQ4 1221 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ZNF75CPQ92670 426 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 EFHD2Q96C19 240 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 HAVCR1Q96D42 359 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 MRPL45Q9BRJ2 306 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 RBM7Q9Y580 266 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 RGSL1A5PLK6 1076 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FZD9O00144 591 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 KERAO60938 352 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 GNPDA1P46926 289 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 DGKEP52429 567 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FAM98AQ8NCA5 519 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 CPNE2Q96FN4 548 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 CCM2Q9BSQ5 444 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TRIM2Q9C040 744 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 RSPH9Q9H1X1 276 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 KCNF1Q9H3M0 494 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 MATN3O15232 486 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FSBPO95073 299 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 CAPN1P07384 714 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ITGA2BP08514 1039 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 PSMB9P28065 219 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 GRIA4P48058 902 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 DMPKQ09013 629 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TAF1AQ15573 450 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 DPY19L1Q2PZI1 675 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ECHDC2Q86YB7 292 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 MIPEPQ99797 713 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 PCDH12Q9NPG4 1184 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 EIF2B3Q9NR50 452 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 DDX18Q9NVP1 670 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 HAO1Q9UJM8 370 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 PDE4DIPQ5VU43 2346 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FAM237BA0A1B0GVD1 139 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 UBE2QL1A1L167 161 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TRBC1P01850 177 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 CTPS1P17812 591 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 GABRB2P47870 512 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 MYBPC1Q00872 1141 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FAAP100Q0VG06 881 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 LCN1P1Q5VSP4 162 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ENKURQ8TC29 256 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 VPS35Q96QK1 796 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 HIST1H2AAQ96QV6 131 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 C17orf62Q9BQA9 187 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 PCDHGA11Q9Y5H2 935 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 CPQQ9Y646 472 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 H0YJX3 145 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 MPZL2O60487 215 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TIPRLO75663 272 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 WFS1O76024 890 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 GNAZP19086 355 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 OXTRP30559 389 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TNFSF9P41273 254 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 CLCNKBP51801 687 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ATP12AP54707 1039 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 RPL38P63173 70 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 ECT2LQ008S8 904 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 TMPRSS11AQ6ZMR5 421 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 OR8H2Q8N162 312 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms