RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 LONRF2Q1L5Z9 754 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 SKIDA1Q1XH10 827 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 PYCR3Q53H96 274 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 DHRS13Q6UX07 377 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 GSTA5Q7RTV2 222 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 KLHDC8BQ8IXV7 354 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 LSMEM2Q8N112 164 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 GPR26Q8NDV2 337 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 GDAP1Q8TB36 358 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 IFI44Q8TCB0 444 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 MAPK15Q8TD08 544 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 GLYATL1Q969I3 302 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 SH3KBP1Q96B97 665 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 PDXPQ96GD0 296 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 DEPDC7Q96QD5 511 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 TTC1Q99614 292 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 TBL1YQ9BQ87 522 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 HERPUD2Q9BSE4 406 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 FICDQ9BVA6 458 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 NRSN2Q9GZP1 204 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 TCEAL2Q9H3H9 227 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-222ENST00000557356 STN1Q9H668 368 aaKnown RBP7.79□□□□□ -1.16
PSEN1-222ENST00000557356 TTC7AQ9ULT0 858 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-222ENST00000557356 SUFUQ9UMX1 484 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 CLCA2Q9UQC9 943 aa7.79□□□□□ -1.16
PSEN1-222ENST00000557356 DNMT3AQ9Y6K1 912 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-222ENST00000557356 CABIN1Q9Y6J0 2220 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 GOLGA6L10A0A0M3HER8 536 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 GLYATL1P3A0A0U1RQE8 302 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 RHPN2P1A8MT19 583 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 GRID2O43424 1007 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 AP2A1O95782 977 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 MT-CO3P00414 261 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 SOD1P00441 154 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 IFNB1P01574 187 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 SLC4A1P02730 911 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 PROS1P07225 676 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 TCP1P17987 556 aaKnown RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 PPARGP37231 505 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 ACTR1BP42025 376 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 CHRNA4P43681 627 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 GPR3P46089 330 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 ACTR1AP61163 376 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 CTBSQ01459 385 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 CDH17Q12864 832 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 OASLQ15646 514 aaKnown RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 GPR33Q49SQ1 333 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 C14orf28Q4W4Y0 310 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 ARMC3Q5W041 872 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 KCTD11Q693B1 232 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 DOK6Q6PKX4 331 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 RFLNAQ6ZTI6 216 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 NLRP9Q7RTR0 991 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 EFL1Q7Z2Z2 1120 aaKnown RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 SLC35F3Q8IY50 421 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 TTC30BQ8N4P2 665 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 BEND7Q8N7W2 519 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 DNAAF3Q8N9W5 541 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 GPR156Q8NFN8 814 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 ZNF398Q8TD17 642 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 ZDHHC1Q8WTX9 485 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 STYXQ8WUJ0 223 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 C1orf54Q8WWF1 131 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 ULK4Q96C45 1275 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 EID2BQ96D98 161 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 PDLIM2Q96JY6 352 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 TMEM74Q96NL1 305 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 WDR24Q96S15 920 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 DPYSL5Q9BPU6 564 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 FAM118BQ9BPY3 351 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 C10orf88Q9H8K7 445 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 IL26Q9NPH9 171 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 MRPL40Q9NQ50 206 aaKnown RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 TAAR2Q9P1P5 351 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 SIRPGQ9P1W8 387 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 CNOT6Q9ULM6 557 aaKnown RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 R3HDM2Q9Y2K5 976 aaKnown RBP7.78□□□□□ -1.16
PSEN1-222ENST00000557356 TMEM98Q9Y2Y6 226 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 SPO11Q9Y5K1 396 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 SLC30A1Q9Y6M5 507 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 KNL1Q8NG31 2342 aa7.78□□□□□ -1.16
PSEN1-222ENST00000557356 KIR2DS5A0A0G2JLQ3 304 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 A0A0G2JNG1 304 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 A0A0U1RQS6 177 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 FADS2P1A8MWK0 482 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 CFAP99D6REC4 459 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 KIR2DS3K7RE56 304 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 CHUKO15111 745 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 DNAJC6O75061 913 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 ATP1A1P05023 1023 aaKnown RBP7.77□□□□□ -1.17
PSEN1-222ENST00000557356 GSTM1P09488 218 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 ITGALP20701 1170 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 IDSP22304 550 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 MLLT3P42568 568 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-222ENST00000557356 POLD2P49005 469 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 INSM1Q01101 510 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-222ENST00000557356 GSTM4Q03013 218 aa7.77□□□□□ -1.17
PSEN1-222ENST00000557356 CCDC173Q0VFZ6 552 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms