RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 FAM207AQ9NSI2 230 aaPredicted RBP10.13□□□□□ -0.79
RDH11-210ENST00000557331 SEPT11Q9NVA2 429 aaKnown RBP10.13□□□□□ -0.79
RDH11-210ENST00000557331 TMEM9Q9P0T7 183 aa10.13□□□□□ -0.79
RDH11-210ENST00000557331 CPNE7Q9UBL6 633 aa10.13□□□□□ -0.79
RDH11-210ENST00000557331 AMACRQ9UHK6 382 aa10.13□□□□□ -0.79
RDH11-210ENST00000557331 RPL26L1Q9UNX3 145 aaKnown RBP10.13□□□□□ -0.79
RDH11-210ENST00000557331 PCDHGA9Q9Y5G4 932 aaKnown RBP10.13□□□□□ -0.79
RDH11-210ENST00000557331 ST14Q9Y5Y6 855 aa10.13□□□□□ -0.79
RDH11-210ENST00000557331 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
RDH11-210ENST00000557331 PIPSLA2A3N6 862 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 NPIPB15A6NHN6 443 aaPredicted RBP10.12□□□□□ -0.79
RDH11-210ENST00000557331 H3BRJ5 948 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
RDH11-210ENST00000557331 CREG1O75629 220 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 MAP3K6O95382 1288 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 ASMTLO95671 621 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 C9P02748 559 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 KRT7P08729 469 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 XRCC1P18887 633 aaPredicted RBP10.12□□□□□ -0.79
RDH11-210ENST00000557331 EPHB1P54762 984 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 MLLT10P55197 1068 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 FOXM1Q08050 763 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
RDH11-210ENST00000557331 PPP6R3Q5H9R7 873 aaPredicted RBP10.12□□□□□ -0.79
RDH11-210ENST00000557331 CAPRIN2Q6IMN6 1127 aaKnown RBP10.12□□□□□ -0.79
RDH11-210ENST00000557331 DOK6Q6PKX4 331 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 TMCO3Q6UWJ1 677 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 UNC5BQ8IZJ1 945 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 MCOLN2Q8IZK6 566 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 AOPEPQ8N6M6 819 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 NEK11Q8NG66 645 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 CPT1CQ8TCG5 803 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 ZDHHC12Q96GR4 267 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 C9orf72Q96LT7 481 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 CTRCQ99895 268 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 AGPAT1Q99943 283 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 ABCG8Q9H221 673 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 CARD9Q9H257 536 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 NLRC4Q9NPP4 1024 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 TLK1Q9UKI8 766 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 CRYBG3Q68DQ2 2970 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 CELSR2Q9HCU4 2923 aa10.12□□□□□ -0.79
RDH11-210ENST00000557331 A0A0J9YYE9 177 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 NDUFA10O95299 355 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 TRBC1P01850 177 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 FGF5P12034 268 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 FERP16591 822 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 LHCGRP22888 699 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 CASP14P31944 242 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PCK1P35558 622 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 MMP13P45452 471 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PGDP52209 483 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PDE1BQ01064 536 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PTSQ03393 145 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 NFATC2Q13469 925 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 MAMLD1Q13495 774 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 SEMA5AQ13591 1074 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 DPYSQ14117 519 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 ERV3-1Q14264 604 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 LRRC66Q68CR7 880 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PLEKHA7Q6IQ23 1121 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PPP1R3BQ86XI6 285 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 RASGRP3Q8IV61 690 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 ATPAF2Q8N5M1 289 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 ENOX1Q8TC92 643 aaKnown RBP10.11□□□□□ -0.79
RDH11-210ENST00000557331 CCHCR1Q8TD31 782 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 PIH1D2Q8WWB5 315 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 POLR1EQ9GZS1 481 aaKnown RBP10.11□□□□□ -0.79
RDH11-210ENST00000557331 TWSG1Q9GZX9 223 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 ZNF768Q9H5H4 540 aaKnown RBP10.11□□□□□ -0.79
RDH11-210ENST00000557331 MRPL47Q9HD33 250 aaKnown RBP10.11□□□□□ -0.79
RDH11-210ENST00000557331 PDE7BQ9NP56 450 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 RAD18Q9NS91 495 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 SIDT1Q9NXL6 827 aaKnown RBP10.11□□□□□ -0.79
RDH11-210ENST00000557331 TMEM63CQ9P1W3 806 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 EPHA6Q9UF33 1036 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 TBC1D29Q9UFV1 150 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 CROTQ9UKG9 612 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 MYO6Q9UM54 1294 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 TMEM98Q9Y2Y6 226 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 SPENQ96T58 3664 aaKnown RBP10.11□□□□□ -0.79
RDH11-210ENST00000557331 LRBAP50851 2863 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 SEC16AO15027 2179 aa10.11□□□□□ -0.79
RDH11-210ENST00000557331 TRBV23OR9-2A0A075B6M9 112 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 FAM170AA1A519 330 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 A6NCN8 305 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 KLHL41O60662 606 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 DNAJC6O75061 913 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 KATNA1O75449 491 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 UBXN7O94888 489 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 SOD1P00441 154 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 VIPP01282 170 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 GZMAP12544 262 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 AMD1P17707 334 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 MIPP30301 263 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 STC1P52823 247 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 RPS15P62841 145 aaKnown RBP10.1□□□□□ -0.79
RDH11-210ENST00000557331 TRAF2Q12933 501 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 DPYSL2Q16555 572 aa10.1□□□□□ -0.79
RDH11-210ENST00000557331 PAPD7Q5XG87 772 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms