RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 PRSS38A1L453 326 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 SH3BP5O60239 455 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 PCDHGA12O60330 932 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A9O60656 530 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 PPFIA2O75334 1257 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 AVILO75366 819 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 RASGRP1O95267 797 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 PRAMEF1O95521 474 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 ASMTLO95671 621 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 TUBB4AP04350 444 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 CEACAM5P06731 702 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 CELA2BP08218 269 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A6P19224 532 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A1P22309 533 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A4P22310 534 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 DGKAP23743 735 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 MGAT1P26572 445 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A3P35503 534 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A5P35504 534 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 HK3P52790 923 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 HNRNPKP61978 463 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 CDK16Q00536 496 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 PDE1BQ01064 536 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 SLC14A1Q13336 389 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 C1orf61Q13536 156 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 DHX34Q14147 1143 aaKnown RBP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 LRRC8BQ6P9F7 803 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 SYDE1Q6ZW31 735 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 MARK2Q7KZI7 788 aaKnown RBP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 KANSL1Q7Z3B3 1105 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 NAXDQ8IW45 347 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 ZNF548Q8NEK5 533 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 LMX1AQ8TE12 382 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 SLC13A1Q9BZW2 595 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 TRIM31Q9BZY9 425 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A7Q9HAW7 530 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A10Q9HAW8 530 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 UGT1A8Q9HAW9 530 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 NLE1Q9NVX2 485 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-225ENST00000556798 SYBUQ9NX95 663 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 TMPRSS11EQ9UL52 423 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 SUFUQ9UMX1 484 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 TCAF1Q9Y4C2 921 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 PCDHGB2Q9Y5G2 931 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 PCNX2A6NKB5 2137 aa17.35■□□□□ 0.37
SHMT2-225ENST00000556798 HEATR9A2RTY3 570 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 CNOT1A5YKK6 2376 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 MROH6A6NGR9 719 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 DNALI1O14645 258 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 FFAR2O15552 330 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 MTX2O75431 263 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 SLC25A14O95258 325 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 FUCA1P04066 466 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 COL5A1P20908 1838 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 GNPDA1P46926 289 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 GOLGA4Q13439 2230 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PEX6Q13608 980 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 SUZ12Q15022 739 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 WHAMMP3Q1A5X7 153 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PRRT3Q5FWE3 981 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 RNASEH2BQ5TBB1 312 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 IZUMO3Q5VZ72 239 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PDPK2PQ6A1A2 396 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 ZNF572Q7Z3I7 529 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 CAND1Q86VP6 1230 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PPIL6Q8IXY8 311 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 SLC25A45Q8N413 288 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 NAT8LQ8N9F0 302 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PPHLN1Q8NEY8 458 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 KIF18AQ8NI77 898 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 STYXQ8WUJ0 223 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 GLYATL1Q969I3 302 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 RANBP9Q96S59 729 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 CARS2Q9HA77 564 aaKnown RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 SLC2A6Q9UGQ3 507 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 SLC17A4Q9Y2C5 497 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PCYT1BQ9Y5K3 369 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-225ENST00000556798 MRFAP1Q9Y605 127 aa17.34■□□□□ 0.37
SHMT2-225ENST00000556798 PIKFYVEQ9Y2I7 2098 aa17.33■□□□□ 0.37
SHMT2-225ENST00000556798 TNFRSF10CO14798 259 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 TM4SF5O14894 197 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 FLRT2O43155 660 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 RAD51CO43502 376 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 SRP72O76094 671 aaKnown RBP17.33■□□□□ 0.36
SHMT2-225ENST00000556798 TNFP01375 233 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 CTSEP14091 401 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 ADRA1DP25100 572 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 IVDP26440 423 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 MC4RP32245 332 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 HADHAP40939 763 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 BLKP51451 505 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 ARSDP51689 593 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 SARNPP82979 210 aaKnown RBP17.33■□□□□ 0.36
SHMT2-225ENST00000556798 XIAPP98170 497 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 KHDC1Q4VXA5 237 aaKnown RBP17.33■□□□□ 0.36
SHMT2-225ENST00000556798 PHYKPLQ8IUZ5 450 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 EID2Q8N6I1 236 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 MCUQ8NE86 351 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 DEFB124Q8NES8 71 aa17.33■□□□□ 0.36
SHMT2-225ENST00000556798 GDAP1Q8TB36 358 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms