RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 APPL1Q9UKG1 709 aa17.3■□□□□ 0.36
TUBB3-211ENST00000556536 CNOT6Q9ULM6 557 aaKnown RBP17.3■□□□□ 0.36
TUBB3-211ENST00000556536 OR1A2Q9Y585 309 aa17.3■□□□□ 0.36
TUBB3-211ENST00000556536 HS3ST3A1Q9Y663 406 aa17.3■□□□□ 0.36
TUBB3-211ENST00000556536 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
TUBB3-211ENST00000556536 FAM169AQ9Y6X4 670 aa17.3■□□□□ 0.36
TUBB3-211ENST00000556536 BPTFQ12830 3046 aa17.3■□□□□ 0.36
TUBB3-211ENST00000556536 GOLGA8KD6RF30 607 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 GOLGA8TH3BQL2 631 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 TTC4O95801 387 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 TSHRP16473 764 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 FOXN2P32314 431 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 GPX6P59796 221 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 PRAMEP78395 509 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 ZRANB3Q5FWF4 1079 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 SPANXN3Q5MJ09 141 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 ADAMTSL4Q6UY14 1074 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 RELL1Q8IUW5 271 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 PALM2Q8IXS6 379 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 DCLK2Q8N568 766 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
TUBB3-211ENST00000556536 ZNF398Q8TD17 642 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 DTX3LQ8TDB6 740 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 ZSCAN5AQ9BUG6 496 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 TSPYL1Q9H0U9 437 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 ASB8Q9H765 288 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 AASDHPPTQ9NRN7 309 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 TMEM74BQ9NUR3 256 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 NINJ2Q9NZG7 142 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 MARCH4Q9P2E8 410 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-211ENST00000556536 RAB21Q9UL25 225 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 EPG5Q9HCE0 2579 aa17.29■□□□□ 0.36
TUBB3-211ENST00000556536 A0A1W2PR77 199 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 INPP4BO15327 924 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 WNT1P04628 370 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 PAMP19021 973 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 TEAD1P28347 426 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 SSTR1P30872 391 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 TRIM23P36406 574 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 PFN3P60673 137 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 NFATC2Q13469 925 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 STAT4Q14765 748 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 KYNUQ16719 465 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 LONRF1Q17RB8 773 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 RSPO4Q2I0M5 234 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-211ENST00000556536 TPRG1LQ5T0D9 272 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 TRMT10BQ6PF06 316 aaKnown RBP17.28■□□□□ 0.36
TUBB3-211ENST00000556536 AFTPHQ6ULP2 937 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 LAYNQ6UX15 382 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 CEP128Q6ZU80 1094 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 PTAR1Q7Z6K3 402 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-211ENST00000556536 ABI3BPQ7Z7G0 1075 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 TRIM74Q86UV6 250 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 HEATR4Q86WZ0 1026 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 PIANPQ8IYJ0 282 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 SUMF1Q8NBK3 374 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 OR13H1Q8NG92 308 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 OR4L1Q8NH43 312 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 FUBP1Q96AE4 644 aaKnown RBP17.28■□□□□ 0.36
TUBB3-211ENST00000556536 CNTNAP3BQ96NU0 1288 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 APOOQ9BUR5 198 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 LGR4Q9BXB1 951 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 CNTNAP3Q9BZ76 1288 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 TXLNGYQ9BZA5 131 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 CDC42EP4Q9H3Q1 356 aaKnown RBP17.28■□□□□ 0.36
TUBB3-211ENST00000556536 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 ARFGAP3Q9NP61 516 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 C20orf96Q9NUD7 363 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-211ENST00000556536 PILRBQ9UKJ0 227 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 SLC30A1Q9Y6M5 507 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 FANCMQ8IYD8 2048 aa17.28■□□□□ 0.36
TUBB3-211ENST00000556536 KMT2BQ9UMN6 2715 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-211ENST00000556536 NCOR2Q9Y618 2525 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 ERVK-10P10266 1014 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 ITGALP20701 1170 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 SDHBP21912 280 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 RACK1P63244 317 aaKnown RBP17.27■□□□□ 0.36
TUBB3-211ENST00000556536 CACNG1Q06432 222 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 SEMA3AQ14563 771 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 PDPK2PQ6A1A2 396 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 PSAPL1Q6NUJ1 521 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 KYAT3Q6YP21 454 aaKnown RBP17.27■□□□□ 0.36
TUBB3-211ENST00000556536 Q6ZSR6 202 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 SNX20Q7Z614 316 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 MYRIPQ8NFW9 859 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 BTN2A2Q8WVV5 523 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.27■□□□□ 0.36
TUBB3-211ENST00000556536 PIGKQ92643 395 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 GLYATL1Q969I3 302 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 TEX101Q9BY14 249 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 WDR26Q9H7D7 661 aa17.27■□□□□ 0.36
TUBB3-211ENST00000556536 ABCA7Q8IZY2 2146 aa17.27■□□□□ 0.35
TUBB3-211ENST00000556536 LRRK1Q38SD2 2015 aa17.26■□□□□ 0.35
TUBB3-211ENST00000556536 TRBV5-4A0A0C4DH59 114 aa17.26■□□□□ 0.35
TUBB3-211ENST00000556536 A6NNZ2 444 aa17.26■□□□□ 0.35
TUBB3-211ENST00000556536 AGAP14A8MT82 685 aa17.26■□□□□ 0.35
TUBB3-211ENST00000556536 BCAT2O15382 392 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-211ENST00000556536 CD3EAPO15446 510 aaKnown RBP17.26■□□□□ 0.35
TUBB3-211ENST00000556536 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
TUBB3-211ENST00000556536 KRT37O76014 449 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms