RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ERVK-6Q9BXR3 956 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ASB8Q9H765 288 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZNF696Q9H7X3 374 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 KRT84Q9NSB2 600 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ST3GAL5Q9UNP4 418 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 LRP5O75197 1615 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 A0A1W2PQH9 124 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 EFCAB10A6NFE3 127 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 ENTPD1P49961 510 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 CPSF6Q16630 551 aaKnown RBP eCLIP14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 TIMM50Q3ZCQ8 353 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZCCHC8Q6NZY4 707 aaKnown RBP14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 MOB2Q70IA6 237 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 HTRA1Q92743 480 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 MED8Q96G25 268 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 CDK5RAP1Q96SZ6 601 aaKnown RBP14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 PCYT2Q99447 389 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 TDRD1Q9BXT4 1180 aaKnown RBP14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 PDLIM7Q9NR12 457 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 FAM105AQ9NUU6 356 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 SNX8Q9Y5X2 465 aa14.96□□□□□ -0.02
ARHGEF40-207ENST00000556399 A0A1B0GVG6 124 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 SIX3O95343 332 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ANGPTL1O95841 491 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 PENKP01210 267 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 FTH1P02794 183 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RAB15P59190 212 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ACSM2AQ08AH3 577 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 CTC1Q2NKJ3 1217 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 STEAP4Q687X5 459 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ACSM2BQ68CK6 577 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 FAM43BQ6ZT52 329 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 GPR180Q86V85 440 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ARL10Q8N8L6 244 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 KBTBD8Q8NFY9 601 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 TMEM174Q8WUU8 243 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 MYDGFQ969H8 173 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 IFT80Q9P2H3 777 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ELOVL7A1L3X0 281 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 EGFRP00533 1210 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 CNPP09543 421 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 PKMP14618 531 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 PDZK1Q5T2W1 519 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RTP4Q96DX8 246 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 KANSL3Q9P2N6 904 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 SNX6Q9UNH7 406 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RBMX2Q9Y388 322 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 TAF4O00268 1085 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 CYP3A5P20815 502 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 IGFBP5P24593 272 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 CYP4F2P78329 520 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 CYP4F3Q08477 520 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 CNTN1Q12860 1018 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 TSNQ15631 228 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RBM20Q5T481 1227 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 KRT73Q86Y46 540 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF513Q8N8E2 541 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 TAMM41Q96BW9 452 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 SMPD4Q9NXE4 827 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 GNPTGQ9UJJ9 305 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 TOR1BO14657 336 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 OR4F21O95013 312 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 MRPS6P82932 125 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 GNA12Q03113 381 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 DUSP28Q4G0W2 176 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 OGFOD2Q6N063 350 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RETSATQ6NUM9 610 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 C19orf18Q8NEA5 215 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 MCOLN3Q8TDD5 553 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RSPH1Q8WYR4 309 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ITFG2Q969R8 447 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 ABCG8Q9H221 673 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RASSF1Q9NS23 344 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
ARHGEF40-207ENST00000556399 RFXANKO14593 260 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 UGT2B11O75310 529 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 LRATO95237 230 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 HTR7P34969 479 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 MTPNP58546 118 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 XKR5Q6UX68 686 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 NAPRTQ6XQN6 538 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ATG14Q6ZNE5 492 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 MON1AQ86VX9 555 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 CYP4Z1Q86W10 505 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 HIPK1Q86Z02 1210 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 PROX1Q92786 737 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ESAMQ96AP7 390 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ERLEC1Q96DZ1 483 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 TUBA8Q9NY65 449 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRIM17Q9Y577 477 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 DDX60Q8IY21 1712 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 SNPHO15079 494 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALDH1A1P00352 501 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 RFTN1Q14699 578 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 AKAP14Q86UN6 197 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 RTL3Q8N8U3 475 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ITCHQ96J02 903 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 DEPDC7Q96QD5 511 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ENOPH1Q9UHY7 261 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ANKRD36CQ5JPF3 1778 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms