RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CARS2Q9HA77 564 aaKnown RBP11.47□□□□□ -0.57
SLIRP-205ENST00000556310 LZTFL1Q9NQ48 299 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 RAD18Q9NS91 495 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 TRNAU1APQ9NX07 287 aaKnown RBP11.47□□□□□ -0.57
SLIRP-205ENST00000556310 MOSPD1Q9UJG1 213 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 SUFUQ9UMX1 484 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 SHOC2Q9UQ13 582 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 ANKRD11Q6UB99 2663 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-205ENST00000556310 EME2A4GXA9 379 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-205ENST00000556310 FADS2P1A8MWK0 482 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 PROS1P07225 676 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 PSMB4P28070 264 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 CHRNA4P43681 627 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 GNPDA1P46926 289 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 INSM1Q01101 510 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-205ENST00000556310 ILF3Q12906 894 aaKnown RBP eCLIP11.46□□□□□ -0.57
SLIRP-205ENST00000556310 SLC1A5Q15758 541 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF569Q5MCW4 686 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 ANKRD20A2Q5SQ80 823 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 MEI1Q5TIA1 1274 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 ANKRD20A1Q5TYW2 823 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 ANKRD20A3Q5VUR7 823 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 PDPK2PQ6A1A2 396 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 DOK6Q6PKX4 331 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 EFL1Q7Z2Z2 1120 aaKnown RBP11.46□□□□□ -0.57
SLIRP-205ENST00000556310 TAF8Q7Z7C8 310 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 TRIM74Q86UV6 250 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 CACTIN-AS1Q8N1I8 211 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 KYQ8NBH2 561 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 SLC35B2Q8TB61 432 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 CCDC110Q8TBZ0 833 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 SCARF2Q96GP6 870 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-205ENST00000556310 ZSCAN5AQ9BUG6 496 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 CARD9Q9H257 536 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 HACD3Q9P035 362 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 VPS18Q9P253 973 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 GPR34Q9UPC5 381 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 R3HDM2Q9Y2K5 976 aaKnown RBP11.46□□□□□ -0.57
SLIRP-205ENST00000556310 SPO11Q9Y5K1 396 aa11.46□□□□□ -0.57
SLIRP-205ENST00000556310 BPTFQ12830 3046 aa11.46□□□□□ -0.58
SLIRP-205ENST00000556310 APC2O95996 2303 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 ACACAQ13085 2346 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 TCRBV7S2A1N4TA0A589 114 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 CPED1A4D0V7 1026 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 FAM149AA5PLN7 773 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 C5orf60A6NFR6 353 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 INPP4BO15327 924 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 OPA1O60313 960 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 FUCA1P04066 466 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 HMGCLP35914 325 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 POLD2P49005 469 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 CLDN6P56747 220 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 PRPSAP1Q14558 356 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 ALS2CLQ60I27 953 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 KLHDC8BQ8IXV7 354 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 TTC30BQ8N4P2 665 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 SLC25A41Q8N5S1 370 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 TRAM1L1Q8N609 369 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 DCBLD1Q8N8Z6 715 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 GPR26Q8NDV2 337 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 TRIM58Q8NG06 486 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 GPBAR1Q8TDU6 330 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 PLEKHG4BQ96PX9 1271 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 OR2M4Q96R27 311 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 FICDQ9BVA6 458 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 SPATA16Q9BXB7 569 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 GSDMCQ9BYG8 508 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 FRMD8P1Q9BZ68 369 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-205ENST00000556310 SUDS3Q9H7L9 328 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-205ENST00000556310 SIRPGQ9P1W8 387 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 CNOT6Q9ULM6 557 aaKnown RBP11.45□□□□□ -0.58
SLIRP-205ENST00000556310 PADI4Q9UM07 663 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 PPP2R2CQ9Y2T4 447 aa11.45□□□□□ -0.58
SLIRP-205ENST00000556310 AAR2Q9Y312 384 aaKnown RBP11.45□□□□□ -0.58
SLIRP-205ENST00000556310 CACNA1BQ00975 2339 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 AURKAO14965 403 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 JUPP14923 745 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 BPIP17213 487 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 ADRA1AP35348 466 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 ADCY8P40145 1251 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 LRP8Q14114 963 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 PERM1Q5SV97 790 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 CDCP2Q5VXM1 449 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 ZDHHC20Q5W0Z9 365 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 ARHGEF18Q6ZSZ5 1173 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 GLT6D1Q7Z4J2 308 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 NRROSQ86YC3 692 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 MARCH9Q86YJ5 346 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 SLC13A5Q86YT5 568 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-205ENST00000556310 GALNT13Q8IUC8 556 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 PHYKPLQ8IUZ5 450 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 FAM71DQ8N9W8 422 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 KDF1Q8NAX2 398 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-205ENST00000556310 FAM46DQ8NEK8 389 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 GPR156Q8NFN8 814 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 OR6C4Q8NGE1 309 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 MAPK15Q8TD08 544 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 BLOC1S5Q8TDH9 187 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms