RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TMEM81Q6P7N7 255 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 SLC22A25Q6T423 547 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 ITIH6Q6UXX5 1313 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 FOXRED2Q8IWF2 684 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 ZNF34Q8IZ26 560 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 ADGRF5Q8IZF2 1346 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 RNF113BQ8IZP6 322 aaKnown RBP3.06□□□□□ -1.92
SCFD1-218ENST00000556256 CPXM2Q8N436 756 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 STPG4Q8N801 248 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 AMER3Q8N944 861 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 TM9SF4Q92544 642 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 HSPH1Q92598 858 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 HDAC2Q92769 488 aaKnown RBP3.06□□□□□ -1.92
SCFD1-218ENST00000556256 TAAR8Q969N4 342 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 POM121L2Q96KW2 1035 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 ZNF354BQ96LW1 612 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 POLR3CQ9BUI4 534 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-218ENST00000556256 SLC25A18Q9H1K4 315 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 CNGB3Q9NQW8 809 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 KCND2Q9NZV8 630 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 HSPB7Q9UBY9 170 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 SARDHQ9UL12 918 aa3.06□□□□□ -1.92
SCFD1-218ENST00000556256 A0A087X002 238 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 A0A1W2PPH5 198 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 PSMD14O00487 310 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 TSPAN4O14817 238 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 CEP104O60308 925 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 RTN3O95197 1032 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 DDX58O95786 925 aaKnown RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 ERVK-10P10266 1014 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 COX7A2P14406 83 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 MYOD1P15172 320 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 DPEP1P16444 411 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 MAN1A1P33908 653 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 ARL1P40616 181 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 CCR9P51686 369 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 TERF1P54274 439 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 EIF5P55010 431 aaKnown RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 UFM1P61960 85 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 DCAF7P61962 342 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 NEDD9Q14511 834 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 CTF1Q16619 201 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 SLC9B1Q4ZJI4 515 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 XKR6Q5GH73 641 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 GPATCH4Q5T3I0 446 aaKnown RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 FAM69AQ5T7M9 428 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 FAAP20Q6NZ36 180 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 PRSS45Q7RTY3 260 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 R3HCC1LQ7Z5L2 792 aaKnown RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 DNAAF1Q8NEP3 725 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 TDRD7Q8NHU6 1098 aaKnown RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 GDPD5Q8WTR4 605 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 SNAPC3Q92966 411 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 ZHX3Q9H4I2 956 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 BRF2Q9HAW0 419 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 ENTPD7Q9NQZ7 604 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 SMC4Q9NTJ3 1288 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 TAS2R10Q9NYW0 307 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 CISD1Q9NZ45 108 aaKnown RBP3.05□□□□□ -1.92
SCFD1-218ENST00000556256 MPP6Q9NZW5 540 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 PEMTQ9UBM1 199 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 AMDHD2Q9Y303 409 aa3.05□□□□□ -1.92
SCFD1-218ENST00000556256 TDRD9Q8NDG6 1382 aaKnown RBP3.04□□□□□ -1.92
SCFD1-218ENST00000556256 NPIPB15A6NHN6 443 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-218ENST00000556256 KLRF2D3W0D1 207 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 H7C423 109 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 RTL8CO15255 209 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 TGFB1I1O43294 461 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 USO1O60763 962 aaKnown RBP3.04□□□□□ -1.92
SCFD1-218ENST00000556256 CLEC3BP05452 202 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 HEXAP06865 529 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 CD48P09326 243 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 DNAH10OSP0CZ25 163 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-218ENST00000556256 ABCD1P33897 745 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 RGS2P41220 211 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 PAFAH1B1P43034 410 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 MMP14P50281 582 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 ZFP69Q49AA0 526 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 WDR38Q5JTN6 314 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 SIRPB2Q5JXA9 342 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 RGMBQ6NW40 437 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 IL20RBQ6UXL0 311 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 TMTC3Q6ZXV5 915 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 FAM160B2Q86V87 743 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 C11orf65Q8NCR3 313 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 GJC3Q8NFK1 279 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 METTL6Q8TCB7 284 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 MPHOSPH8Q99549 860 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 HAUS8Q9BT25 410 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 CABLES2Q9BTV7 478 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 GLIS2Q9BZE0 524 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-218ENST00000556256 SLC32A1Q9H598 525 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 C20orf141Q9NUB4 165 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 IL1RAPL1Q9NZN1 696 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 KIAA1456Q9P272 454 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 AASSQ9UDR5 926 aa3.04□□□□□ -1.92
SCFD1-218ENST00000556256 PRRC2AP48634 2157 aaKnown RBP3.04□□□□□ -1.92
SCFD1-218ENST00000556256 A0A0U1RQF3 1178 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 ARHGAP10A1A4S6 786 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms