RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ATP1A1-AS1Q5TC04 95 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NCBP2-AS2Q69YL0 99 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 IYDQ6PHW0 289 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SASS6Q6UVJ0 657 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 FAM129CQ86XR2 697 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 EXD1Q8NHP7 514 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SARS2Q9NP81 518 aaKnown RBP14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 FBXO8Q9NRD0 319 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DTLQ9NZJ0 730 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 OGFRQ9NZT2 677 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 VPS18Q9P253 973 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CHKBQ9Y259 395 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ADGRG1Q9Y653 693 aa14.23□□□□□ -0.13
CHMP4BP1-201ENST00000556017 A0A1B0GTH6 734 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZNF891A8MT65 544 aaPredicted RBP14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 A8MU76 341 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZW10O43264 779 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MYBL1P10243 752 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 RAB15P59190 212 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 FOXK1P85037 733 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 HHEXQ03014 270 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TYRO3Q06418 890 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 KLHL30Q0D2K2 578 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SLC10A2Q12908 348 aaPredicted RBP14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 DPYSL3Q14195 570 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 IGFBP7Q16270 282 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 GALNT13Q8IUC8 556 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NRSN1Q8IZ57 195 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 FATE1Q969F0 183 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SLC38A3Q99624 504 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 POLR1EQ9GZS1 481 aaKnown RBP14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 THAP2Q9H0W7 228 aa14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MRPL47Q9HD33 250 aaKnown RBP14.22□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MN1Q10571 1320 aaPredicted RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MATN3O15232 486 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 HLA-DQB2P05538 268 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NFKBIAP25963 317 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SERPINB6P35237 376 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CASRP41180 1078 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SPINT3P49223 89 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 UBE2IP63279 158 aaKnown RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CDC20Q12834 499 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PEX6Q13608 980 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 PIGHQ14442 188 aaPredicted RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SNAP47Q5SQN1 464 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CHST15Q7LFX5 561 aaPredicted RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 RAVER1Q8IY67 606 aaKnown RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NLGN4XQ8N0W4 816 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 BBS5Q8N3I7 341 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 CCDC112Q8NEF3 446 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NLGN4YQ8NFZ3 816 aaPredicted RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 OR10G6Q8NH81 332 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NCSTNQ92542 709 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TSGA13Q96PP4 275 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TEFMQ96QE5 360 aaKnown RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 TBC1D10AQ9BXI6 508 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 SCHIP1Q9P0W5 487 aaPredicted RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 RCOR3Q9P2K3 495 aaPredicted RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 ZNHIT2Q9UHR6 403 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 NENFQ9UMX5 172 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 KCNK6Q9Y257 313 aa14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 MRPS18BQ9Y676 258 aaKnown RBP14.21□□□□□ -0.13
CHMP4BP1-201ENST00000556017 K7EM74 188 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 STK17BO94768 372 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 C9P02748 559 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CYP1A2P05177 515 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 FURINP09958 794 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PRKAR1AP10644 381 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 F3P13726 295 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF28P17035 718 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MAP4P27816 1152 aaKnown RBP14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 STAT5AP42229 794 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CCR10P46092 362 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GFERP55789 205 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NFATC2Q13469 925 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 BIRC2Q13490 618 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NR1I3Q14994 352 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 QPCTQ16769 361 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANO6Q4KMQ2 910 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF648Q5T619 568 aaPredicted RBP14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 LRRC49Q8IUZ0 686 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PQLC3Q8N755 202 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CNTD1Q8N815 330 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 FAF2Q96CS3 445 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RNF31Q96EP0 1072 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TRIM11Q96F44 468 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CATSPER2Q96P56 530 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PRDM8Q9NQV8 689 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF71Q9NQZ8 489 aaPredicted RBP14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RBM22Q9NW64 420 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TMEM63CQ9P1W3 806 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SLC23A2Q9UGH3 650 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANAPC7Q9UJX3 599 aa14.2□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MED13Q9UHV7 2174 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 A0A087X0T9 212 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CAPN5O15484 640 aaPredicted RBP14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NUAK1O60285 661 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms