RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 BNIP3LO60238 219 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 MAGEC1O60732 1142 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 CLDN7O95471 211 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PRAMEF1O95521 474 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 MYOGP15173 224 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 EZRP15311 586 aaKnown RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ITGALP20701 1170 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 EPHA3P29320 983 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PRDX6P30041 224 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ADSLP30566 484 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PGM1P36871 562 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 COPAP53621 1224 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PTPN5P54829 565 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 IL2P60568 153 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 NAA20P61599 178 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 NTHL1P78549 312 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 OR4D1Q15615 310 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PDCD2Q16342 344 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 CDKN3Q16667 212 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SETMARQ53H47 684 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 CTSL3PQ5NE16 218 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 LY6G5CQ5SRR4 150 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ZNF697Q5TEC3 545 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 GRAMD4Q6IC98 578 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 USP45Q70EL2 814 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SPNS2Q8IVW8 549 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SUGP1Q8IWZ8 645 aaKnown RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 AHI1Q8N157 1196 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 CBARPQ8N350 705 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 RBM15BQ8NDT2 890 aaKnown RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ECHDC3Q96DC8 303 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ASIC4Q96FT7 647 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SCRN2Q96FV2 425 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ZSWIM3Q96MP5 696 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SAMD11Q96NU1 681 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ATOH8Q96SQ7 321 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SLC2A11Q9BYW1 496 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 P2RY12Q9H244 342 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 ASB8Q9H765 288 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PIDD1Q9HB75 910 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 MRGBPQ9NV56 204 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 MARK1Q9P0L2 795 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PPIL1Q9Y3C6 166 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 MRPS23Q9Y3D9 190 aaKnown RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 MTF2Q9Y483 593 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 HCFC2Q9Y5Z7 792 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 GLYATL1P3A0A0U1RQE8 302 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 NIPSNAP2O75323 286 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 MTHFD2P13995 350 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 GFAPP14136 432 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 NNMTP40261 264 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 RECQLP46063 649 aaPredicted RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 CCNHP51946 323 aaPredicted RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 POLR2LP62875 67 aaKnown RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 SATB1Q01826 763 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 NFATC2Q13469 925 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 CBX2Q14781 532 aaPredicted RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 PFKFB4Q16877 469 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 GPR33Q49SQ1 333 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 NXNQ6DKJ4 435 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 FAM151BQ6UXP7 276 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 DPY19L3Q6ZPD9 716 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 TPRG1Q6ZUI0 275 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 SPRED2Q7Z698 418 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 ADIPOR2Q86V24 386 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 SERPINA9Q86WD7 417 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 PLPP6Q8IY26 295 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 CELF5Q8N6W0 485 aaKnown RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 PTGR2Q8N8N7 351 aaPredicted RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 SIDT2Q8NBJ9 832 aaKnown RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 CEP70Q8NHQ1 597 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 EXT2Q93063 718 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 MAELQ96JY0 434 aaKnown RBP10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 PPP1R36Q96LQ0 422 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 CLPBQ9H078 707 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 GSTO2Q9H4Y5 243 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 IL26Q9NPH9 171 aa10.02□□□□□ -0.8
EFCAB11-209ENST00000556005 HELZP42694 1942 aaKnown RBP10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 SUPT3HB4E1H0 165 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 UBXN8O00124 270 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 SUPT3HO75486 399 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 ARHGEF15O94989 841 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 CA3P07451 260 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 THRAP10827 490 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 BPIP17213 487 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 RPS3P23396 243 aaKnown RBP eCLIP10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 SPAM1P38567 509 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 KLF10Q13118 480 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 GPM6BQ13491 265 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 NAA25Q14CX7 972 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 UNC50Q53HI1 259 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 ZDHHC20Q5W0Z9 365 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 PTRHD1Q6GMV3 140 aaKnown RBP10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 CRTC1Q6UUV9 634 aa10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 KIAA0907Q7Z7F0 614 aaPredicted RBP10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 RBM23Q86U06 439 aaKnown RBP10.02□□□□□ -0.81
EFCAB11-209ENST00000556005 ZSWIM9Q86XI8 627 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms