RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MRPL38Q96DV4 380 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 MAELQ96JY0 434 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 LRMDAQ9H2I8 198 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TFB2MQ9H5Q4 396 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 LATS2Q9NRM7 1088 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 NEMP2A6NFY4 417 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 ARNTLO00327 626 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 MATN2O00339 956 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 UBFD1O14562 309 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 POP4O95707 220 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 FSHRP23945 695 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 ACRV1P26436 265 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 PTGER3P43115 390 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 LIG3P49916 1009 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 NFATC2Q13469 925 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 FAM83EQ2M2I3 478 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 AGAP9Q5VTM2 703 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TPRG1Q6ZUI0 275 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 SDCCAG8Q86SQ7 713 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 TBC1D1Q86TI0 1168 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 TREML1Q86YW5 311 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 WDR75Q8IWA0 830 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 KDM1BQ8NB78 822 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TTC8Q8TAM2 541 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 SORCS1Q8WY21 1168 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 KCNJ9Q92806 393 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 C1QTNF3Q9BXJ4 246 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 PLA2G2FQ9BZM2 168 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 UNKQ9C0B0 810 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 NMUR2Q9GZQ4 415 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 SPATS2LQ9NUQ6 558 aaKnown RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 GDE1Q9NZC3 331 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 NFKBIL1Q9UBC1 381 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 ZDHHC2Q9UIJ5 367 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TRIM33Q9UPN9 1127 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 RAP2CQ9Y3L5 183 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 ST14Q9Y5Y6 855 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 PRSS21Q9Y6M0 314 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 PRRT4C9JH25 899 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 CHUKO15111 745 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 STX7O15400 261 aaKnown RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 SNUPNO95149 360 aaKnown RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 RBP1P09455 135 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 PKMP14618 531 aaKnown RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 MPSTP25325 297 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 FMO4P31512 558 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 B4GALNT1Q00973 533 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 GBX1Q14549 363 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 COL19A1Q14993 1142 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 ARL13AQ5H913 290 aaPredicted RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 PPP2R2DQ66LE6 453 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 PAQR3Q6TCH7 311 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 CYHR1Q6ZMK1 362 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 FRMD7Q6ZUT3 714 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 SNX20Q7Z614 316 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 LKAAEAR1Q8TD35 194 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 WFIKKN2Q8TEU8 576 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 KIAA1191Q96A73 305 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 PDLIM5Q96HC4 596 aaKnown RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 ACSS2Q9NR19 701 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 ARL8BQ9NVJ2 186 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 CLEC1BQ9P126 229 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 MARCOQ9UEW3 520 aaPredicted RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 ZFP69BQ9UJL9 534 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 A0A1W2PQ67 120 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 FCHO1O14526 889 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 TNRC18O15417 2968 aaPredicted RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 IPO13O94829 963 aaKnown RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 SERPINA6P08185 405 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 KITP10721 976 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 TFEBP19484 476 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 IMPDH1P20839 514 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 SLC6A11P48066 632 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 KPNA2P52292 529 aaKnown RBP8.84□□□□□ -0.99
TDP1-210ENST00000554976 RAB30Q15771 203 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 ZNF678Q5SXM1 525 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 WLSQ5T9L3 541 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 LRRC66Q68CR7 880 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 GDPD4Q6W3E5 623 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 NAT16Q8N8M0 369 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 TTC16Q8NEE8 873 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 BPIFB1Q8TDL5 484 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 INPP5DQ92835 1189 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 CNDP1Q96KN2 507 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 PLEKHG4BQ96PX9 1271 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 WWP1Q9H0M0 922 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 SMOXQ9NWM0 555 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 DKK3Q9UBP4 350 aa8.84□□□□□ -0.99
TDP1-210ENST00000554976 C1orf232A0A0U1RR37 186 aa8.83□□□□□ -1
TDP1-210ENST00000554976 RFXAPO00287 272 aa8.83□□□□□ -1
TDP1-210ENST00000554976 KERAO60938 352 aa8.83□□□□□ -1
TDP1-210ENST00000554976 NIPSNAP2O75323 286 aa8.83□□□□□ -1
TDP1-210ENST00000554976 TULP3O75386 442 aa8.83□□□□□ -1
TDP1-210ENST00000554976 PRAMEF1O95521 474 aa8.83□□□□□ -1
TDP1-210ENST00000554976 ESR1P03372 595 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms