RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CA3P07451 260 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 RBP1P09455 135 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 BMPR1AP36894 532 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 ERVFC1P60507 584 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 SLC2A7Q6PXP3 512 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 SETD3Q86TU7 594 aaPredicted RBP16.51■□□□□ 0.23
PCNX1-209ENST00000554879 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 ULK4Q96C45 1275 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 IMP4Q96G21 291 aaKnown RBP16.51■□□□□ 0.23
PCNX1-209ENST00000554879 COX4I2Q96KJ9 171 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 GPATCH1Q9BRR8 931 aaKnown RBP16.51■□□□□ 0.23
PCNX1-209ENST00000554879 VPS51Q9UID3 782 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 MSRAQ9UJ68 235 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 VPS9D1Q9Y2B5 631 aa16.51■□□□□ 0.23
PCNX1-209ENST00000554879 BTN3A1O00481 513 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 GUCA1CO95843 209 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 HNRNPLP14866 589 aaKnown RBP eCLIP16.5■□□□□ 0.233e-9■■■□□ 16.3
PCNX1-209ENST00000554879 GRIA4P48058 902 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 CLCN5P51795 746 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 FOLH1Q04609 750 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 PEX5LQ8IYB4 626 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 SMYD1Q8NB12 490 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 UTP4Q969X6 686 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 EML4Q9HC35 981 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 TDP1Q9NUW8 608 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 RPP40O75818 363 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 RHOP08100 348 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 MYOGP15173 224 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 NADK2Q4G0N4 442 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 HECTD2Q5U5R9 776 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 PIWIL2Q8TC59 973 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 EME1Q96AY2 570 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 ZNF197O14709 1029 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 EPCAMP16422 314 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 OVCA2Q8WZ82 227 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 ZFYVE19Q96K21 471 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 ALDOAP04075 364 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 LTA4HP09960 611 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 SERPINB5P36952 375 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 ABCE1P61221 599 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 OCA2Q04671 838 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 PFKFB4Q16877 469 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 FNDC3BQ53EP0 1204 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
PCNX1-209ENST00000554879 SEL1L3Q68CR1 1132 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 CDC26Q8NHZ8 85 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 SYTL2Q9HCH5 934 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 ATAD3AQ9NVI7 634 aa16.5■□□□□ 0.23
PCNX1-209ENST00000554879 RGS4P49798 205 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 STK19P49842 368 aaPredicted RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 C1QTNF8P60827 252 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 ALYREFQ86V81 257 aaKnown RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 SCAIQ8N9R8 606 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 TRIM39Q9HCM9 518 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 H3BSA7 217 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 AIM2O14862 343 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 ESRRBO95718 433 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 NRIP1P48552 1158 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 ENTPD1P49961 510 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 RAP1GDS1P52306 607 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 TRMT5Q32P41 509 aaKnown RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 KIAA0930Q6ICG6 404 aaPredicted RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 CLNKQ7Z7G1 428 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 TMEM135Q86UB9 458 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 CROCCP3Q8IVE0 287 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 TCEAL4Q96EI5 215 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 SMIM14Q96QK8 99 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 KIFC1Q9BW19 673 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 FNIP2Q9P278 1114 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 TMEM98Q9Y2Y6 226 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 LCHNA4D1U4 455 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 NEMP2A6NFY4 417 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 KDELR3O43731 214 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 ATP5BP06576 529 aaKnown RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 SGSHP51688 502 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 AQP4P55087 323 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 CDH13P55290 713 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 CHST9Q7L1S5 443 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 ZC3HC1Q86WB0 502 aaKnown RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 PLD6Q8N2A8 252 aaKnown RBP16.49■□□□□ 0.23
PCNX1-209ENST00000554879 MYEOVQ96EZ4 313 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 FEM1CQ96JP0 617 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 FEM1AQ9BSK4 669 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 TIMMDC1Q9NPL8 285 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 ANKRD6Q9Y2G4 727 aa16.49■□□□□ 0.23
PCNX1-209ENST00000554879 F5P12259 2224 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 HMGA1P17096 107 aaKnown RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 PBLDP30039 288 aaPredicted RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 NUP107P57740 925 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 POU4F1Q01851 419 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 AFTPHQ6ULP2 937 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 MOCOSQ96EN8 888 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 ZFYVE1Q9HBF4 777 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 CDYLQ9Y232 598 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms