RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GRIK1P39086 918 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 MAGEA11P43364 429 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 CHN2P52757 468 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 ADIGQ0VDE8 80 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 CUL3Q13618 768 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 PDGFRLQ15198 375 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 TAF12Q16514 161 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 CRY1Q16526 586 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 NFE2Q16621 373 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 CA9Q16790 459 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 DDR2Q16832 855 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 ANO4Q32M45 955 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 ARL13BQ3SXY8 428 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 NAPEPLDQ6IQ20 393 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 DENND5BQ6ZUT9 1274 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 TMPRSS7Q7RTY8 843 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 RABEPKQ7Z6M1 372 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 GLRX5Q86SX6 157 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 CPA6Q8N4T0 437 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 TAB3Q8N5C8 712 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 KYQ8NBH2 561 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 OR2I1PQ8NGU4 316 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 USP33Q8TEY7 942 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 UCMAQ8WVF2 138 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 LZICQ8WZA0 190 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 USP13Q92995 863 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 CCDC126Q96EE4 140 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 P2RY11Q96G91 374 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 PRR11Q96HE9 360 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
SRP54-205ENST00000554803 SLC2A13Q96QE2 648 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 SORT1Q99523 831 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 TTC1Q99614 292 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 SEPT5Q99719 369 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 SPATA16Q9BXB7 569 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 DRC3Q9H069 523 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 LRRC4Q9HBW1 653 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 TCF7L2Q9NQB0 619 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 UTP6Q9NYH9 597 aaKnown RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 KIAA1522Q9P206 1035 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 POMPQ9Y244 141 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 RPS6KL1Q9Y6S9 549 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 TRPC5OSA6NMA1 111 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 BAG2O95816 211 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 DDX6P26196 483 aaKnown RBP eCLIP11.12□□□□□ -0.63
SRP54-205ENST00000554803 MGAT1P26572 445 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 AVPR1AP37288 418 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 PSMD8P48556 350 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 TKTL1P51854 596 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 RPL10AP62906 217 aaKnown RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 CYP4F3Q08477 520 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 PPIDQ08752 370 aaKnown RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 TBL3Q12788 808 aaKnown RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 SLC10A2Q12908 348 aaPredicted RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 KLF10Q13118 480 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 DPYSQ14117 519 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 UBAP2LQ14157 1087 aaKnown RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 MGAT5BQ3V5L5 792 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 SPATS1Q496A3 300 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 RAB41Q5JT25 222 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 LIPMQ5VYY2 423 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 ZYG11AQ6WRX3 759 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 BEND5Q7L4P6 421 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 BHLHA9Q7RTU4 235 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 SLCO6A1Q86UG4 719 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 LRRC49Q8IUZ0 686 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 NAXDQ8IW45 347 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 FRMD1Q8N878 549 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 TRPC4APQ8TEL6 797 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 HDAC11Q96DB2 347 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 NPY6RQ99463 290 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 ULBP1Q9BZM6 244 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 GBA3Q9H227 469 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 PRORYQ9H606 182 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 SNX15Q9NRS6 342 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 TDP1Q9NUW8 608 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 OXSMQ9NWU1 459 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 MARCOQ9UEW3 520 aaPredicted RBP11.12□□□□□ -0.63
SRP54-205ENST00000554803 TLK1Q9UKI8 766 aa11.12□□□□□ -0.63
SRP54-205ENST00000554803 KLHL33A6NCF5 533 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 MATN2O00339 956 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 EEF2KO00418 725 aaKnown RBP11.11□□□□□ -0.63
SRP54-205ENST00000554803 NPHS1O60500 1241 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 UGT1A9O60656 530 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 GRAP2O75791 330 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 TNFAIP8O95379 198 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 SYPP08247 313 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 KITP10721 976 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 HNRNPLP14866 589 aaKnown RBP eCLIP11.11□□□□□ -0.63
SRP54-205ENST00000554803 VAV1P15498 845 aa11.11□□□□□ -0.63
SRP54-205ENST00000554803 VCLP18206 1134 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms