RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 AIMP2Q13155 320 aaKnown RBP3.13□□□□□ -1.91
SCFD1-213ENST00000554776 PRPF4BQ13523 1007 aaKnown RBP3.13□□□□□ -1.91
SCFD1-213ENST00000554776 KEAP1Q14145 624 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 NTRK2Q16620 822 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 CCDC96Q2M329 555 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SPECC1Q5M775 1068 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 DLK2Q6UY11 383 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 PQLC2Q6ZP29 291 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 DPPA4Q7L190 304 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SHFQ7M4L6 423 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 FAM9BQ8IZU0 186 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 TMTC2Q8N394 836 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 CLIP4Q8N3C7 705 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SCCPDHQ8NBX0 429 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 OR14A16Q8NHC5 309 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 FAM216AQ8WUB2 273 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 NUDCD2Q8WVJ2 157 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 TRIB2Q92519 343 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SGCDQ92629 289 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 PPP1R3EQ9H7J1 279 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SEBOXQ9HB31 216 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-213ENST00000554776 ZCCHC17Q9NP64 241 aaKnown RBP3.13□□□□□ -1.91
SCFD1-213ENST00000554776 MTMR10Q9NXD2 777 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 ARHGEF38Q9NXL2 777 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 WWOXQ9NZC7 414 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 OR6C3Q9NZP0 311 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 COPG2Q9UBF2 871 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 GIMAP2Q9UG22 337 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SEC63Q9UGP8 760 aaKnown RBP3.13□□□□□ -1.91
SCFD1-213ENST00000554776 PLAGL1Q9UM63 463 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 ZNF711Q9Y462 761 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 A0A1B0GVM2 712 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 hCG_1809904A0A1W2PP81 198 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 A0A1W2PPE2 198 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 A0A1W2PR64 198 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 A0A1W2PR77 199 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 EME2A4GXA9 379 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CDRT15L2A8MXV6 281 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 OGG1O15527 345 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PAPSS1O43252 624 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PLPP2O43688 288 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ZIC3O60481 467 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 MITFO75030 526 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 GPC4O75487 556 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ZWINTO95229 277 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 VNN2O95498 520 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ICAM1P05362 532 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 APOA4P06727 396 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ZNF12P17014 697 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ACADLP28330 430 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 METAP2P50579 478 aaKnown RBP eCLIP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 STAT2P52630 851 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 DSCR9P59020 149 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 TMF1P82094 1093 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 MRPS5P82675 430 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 GRSF1Q12849 480 aaKnown RBP eCLIP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 AIMP1Q12904 312 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 NEDD9Q14511 834 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 EFNB3Q15768 340 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ASIC2Q16515 512 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CCDC184Q52MB2 194 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PAPPA-AS1Q5QFB9 102 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 GARNL3Q5VVW2 1013 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ADALQ6DHV7 355 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SIGIRRQ6IA17 410 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 FAM47EQ6ZV65 393 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PLPPR4Q7Z2D5 763 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PRPF39Q86UA1 669 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SCYL3Q8IZE3 742 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 AVL9Q8NBF6 648 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 AGBL3Q8NEM8 1001 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PRPF31Q8WWY3 499 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SECISBP2LQ93073 1101 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 OTULINQ96BN8 352 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 GRAMD2BQ96HH9 432 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 TXNDC15Q96J42 360 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 FAM84BQ96KN1 310 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CNDP2Q96KP4 475 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 EGLN2Q96KS0 407 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 HARBI1Q96MB7 349 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ZMAT2Q96NC0 199 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SMC6Q96SB8 1091 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SEPT5Q99719 369 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SLC25A33Q9BSK2 321 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 TEX12Q9BXU0 123 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ANKRD2Q9GZV1 360 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 SLCO5A1Q9H2Y9 848 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CCDC177Q9NQR7 707 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 ACSS1Q9NUB1 689 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 GIMAP4Q9NUV9 329 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 TAB2Q9NYJ8 693 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 WSB2Q9NYS7 404 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CWC15Q9P013 229 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
SCFD1-213ENST00000554776 CDC14AQ9UNH5 594 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 TRPV2Q9Y5S1 764 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 PASKQ96RG2 1323 aa3.12□□□□□ -1.91
SCFD1-213ENST00000554776 IGLV5-52A0A0A0MRZ9 124 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 A0A0U1RQJ8 604 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 LINC01553A4QN01 128 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms