RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CPP00450 1065 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 IFNB1P01574 187 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PCCBP05166 539 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 CKMT1AP12532 417 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 ATP5DP30049 168 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 GARSP41250 739 aaKnown RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 NR2C2P49116 596 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 BLKP51451 505 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 MAXP61244 160 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 MAGOHP61326 146 aaKnown RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 E2F1Q01094 437 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PPARDQ03181 441 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 ACOX1Q15067 660 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PAFAH1B3Q15102 231 aaKnown RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 KYNUQ16719 465 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 RALGPS1Q5JS13 557 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 HES3Q5TGS1 186 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 NCBP2-AS2Q69YL0 99 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 TIGD7Q6NT04 549 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 ZCCHC8Q6NZY4 707 aaKnown RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 NPNTQ6UXI9 565 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 LIPIQ6XZB0 460 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 CDKL3Q8IVW4 592 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PHACTR4Q8IZ21 702 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 RBFAQ8N0V3 343 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PGBD5Q8N414 524 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 EPS8L3Q8TE67 593 aaKnown RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 CPT1BQ92523 772 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 APOLD1Q96LR9 279 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 MGME1Q9BQP7 344 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 APOOQ9BUR5 198 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 NCKIPSDQ9NZQ3 722 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 TTLL3Q9Y4R7 772 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 ZFYVE26Q68DK2 2539 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ERICH4A6NGS2 130 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 E7ESA3 106 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 H7C0C1 242 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 HTRA2O43464 458 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 RECQL5O94762 991 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 MAP3K6O95382 1288 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ANXA6P08133 673 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 GIMD1P0DJR0 217 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 CTSEP14091 401 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 TSHRP16473 764 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 CR2P20023 1033 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 MX2P20592 715 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 HPDP32754 393 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ATP5OP48047 213 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ARL4CP56559 192 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 CLDN6P56747 220 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 GALNT2Q10471 571 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 RALGDSQ12967 914 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 MTM1Q13496 603 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 C1orf61Q13536 156 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 AGERQ15109 404 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 DEFB133Q30KQ1 61 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ARMC12Q5T9G4 340 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ENPP7Q6UWV6 458 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 DPPA4Q7L190 304 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 RD3Q7Z3Z2 195 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 HID1Q8IV36 788 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 FAM71DQ8N9W8 422 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 FAM181AQ8N9Y4 354 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 CCNYQ8ND76 341 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 MDM1Q8TC05 714 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 GLMNQ92990 594 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 NSMCE3Q96MG7 304 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 PWWP2AQ96N64 755 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 SEMA3CQ99985 751 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 FRMD8Q9BZ67 464 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 POLR1EQ9GZS1 481 aaKnown RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 ABCG4Q9H172 646 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 TCEAL2Q9H3H9 227 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-214ENST00000554604 PPCSQ9HAB8 311 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 USP29Q9HBJ7 922 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 PAK5Q9P286 719 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 LGALS13Q9UHV8 139 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 PHTF1Q9UMS5 762 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 DOLKQ9UPQ8 538 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 OR1A2Q9Y585 309 aa12.41□□□□□ -0.42
SHMT2-214ENST00000554604 HACD1B0YJ81 288 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 LMO7DNF2Z398 122 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 CACNB4O00305 520 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TPP1O14773 563 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 MATN3O15232 486 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 RASGRP1O95267 797 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 CYP2A6P11509 494 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms