RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 A0A1B0GVM2 712 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 LOC730098B7Z3J9 87 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PGRMC1O00264 195 aaKnown RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 APOL1O14791 398 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CHADO15335 359 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 HOXC11O43248 304 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 DAPK3O43293 454 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 MFSD11O43934 449 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CLDN11O75508 207 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 TJP3O95049 919 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PENKP01210 267 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 RBP3P10745 1247 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PECAM1P16284 738 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PSMC3P17980 439 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 GDI1P31150 447 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CETN2P41208 172 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CDH4P55283 916 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 LGALS4P56470 323 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 DYNLT1P63172 113 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 TFDP2Q14188 446 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 ODF1Q14990 250 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PAFAH1B3Q15102 231 aaKnown RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PDGFRLQ15198 375 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 TBR1Q16650 682 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 AAK1Q2M2I8 961 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 MPPE1Q53F39 396 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 FSCBQ5H9T9 825 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 TOR2AQ5JU69 321 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 MPP7Q5T2T1 576 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 AFMIDQ63HM1 303 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CXorf57Q6NSI4 855 aaKnown RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 BORAQ6PGQ7 559 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 C1orf228Q6PIY5 440 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CHST9Q7L1S5 443 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 GPR155Q7Z3F1 870 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 TFAP2DQ7Z6R9 452 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 ARHGAP12Q8IWW6 846 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 SLC44A3Q8N4M1 653 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 KLHL36Q8N4N3 616 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 HJURPQ8NCD3 748 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 ATP2A3Q93084 1043 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 HAUS1Q96CS2 278 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 LMLNQ96KR4 655 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 MAK16Q9BXY0 300 aaKnown RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 QRSL1Q9H0R6 528 aaKnown RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 EBF3Q9H4W6 596 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 RETREG1Q9H6L5 497 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 LRRC19Q9H756 370 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CATSPERBQ9H7T0 1116 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 ECT2Q9H8V3 914 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PRDM16Q9HAZ2 1276 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 SPHK2Q9NRA0 654 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 PLK2Q9NYY3 685 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 THEGQ9P2T0 379 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 SAE1Q9UBE0 346 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-212ENST00000554486 CLEC4EQ9ULY5 219 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 FAM50BQ9Y247 325 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 KIAA1549LQ6ZVL6 1849 aa6.41□□□□□ -1.38
SCFD1-212ENST00000554486 NCOR1O75376 2440 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ATG2BQ96BY7 2078 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 MROH6A6NGR9 719 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 NEDD8-MDP1E9PL57 170 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 APOC4-APOC2K7ER74 178 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CACNG3O60359 315 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 SEC24DO94855 1032 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 LUC7L3O95232 432 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 NFATC1O95644 943 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 APOC2P02655 101 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CISD3P0C7P0 127 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 MYBL2P10244 700 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TYRP14679 529 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ZFXP17010 805 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TGM2P21980 687 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 OR1E1P30953 314 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 OTUD4Q01804 1114 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 GALNT2Q10471 571 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 RUNX3Q13761 415 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TUBB2AQ13885 445 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 WHAMMP3Q1A5X7 153 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ANO4Q32M45 955 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 DNTTIP2Q5QJE6 756 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TMCO3Q6UWJ1 677 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ADHFE1Q8IWW8 467 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 YAF2Q8IY57 180 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 UMODL1-AS1Q8N2C9 162 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CARNMT1Q8N4J0 409 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CCDC33Q8N5R6 958 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 PRELID2Q8N945 189 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 OR7D4Q8NG98 312 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 WDR48Q8TAF3 677 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 FIBINQ8TAL6 211 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ACTL9Q8TC94 416 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 DDI1Q8WTU0 396 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 GAB3Q8WWW8 586 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ATG4AQ8WYN0 398 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ARHGEF2Q92974 986 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CHFRQ96EP1 664 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms