RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 LSMEM2Q8N112 164 aa11.65□□□□□ -0.54
SHMT2-212ENST00000554467 SMYD1Q8NB12 490 aa11.65□□□□□ -0.54
SHMT2-212ENST00000554467 POF1BQ8WVV4 589 aa11.65□□□□□ -0.54
SHMT2-212ENST00000554467 ALG14Q96F25 216 aa11.65□□□□□ -0.54
SHMT2-212ENST00000554467 CDH19Q9H159 772 aa11.65□□□□□ -0.54
SHMT2-212ENST00000554467 TNFRSF12AQ9NP84 129 aa11.65□□□□□ -0.54
SHMT2-212ENST00000554467 LRRC14BA6NHZ5 514 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 CAPN14A8MX76 684 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 GRXCR1A8MXD5 290 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 EPOP01588 193 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PPP3CCP48454 512 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PHEXP78562 749 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TEAD2Q15562 447 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 FAM83EQ2M2I3 478 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 ZRANB3Q5FWF4 1079 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 RBM44Q6ZP01 1051 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PTERQ96BW5 349 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 ABCB8Q9NUT2 735 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 GTSE1Q9NYZ3 720 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PRKAG2Q9UGJ0 569 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PLA2G4CQ9UP65 541 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 INSL6Q9Y581 213 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TRAV19A0A0A6YYK7 116 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 DCXO43602 365 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 CRTAMO95727 393 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 OLFM2O95897 454 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 EPCAMP16422 314 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 WEE1P30291 646 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TMED1Q13445 227 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 LPCAT4Q643R3 524 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TMEM198Q66K66 360 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 MRNIPQ6NTE8 343 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TRIM67Q6ZTA4 783 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TMEM25Q86YD3 366 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 C7orf61Q8IZ16 206 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 SREK1Q8WXA9 508 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 EID2BQ96D98 161 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 HSPBAP1Q96EW2 488 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 SARS2Q9NP81 518 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 STOML2Q9UJZ1 356 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 INTS6Q9UL03 887 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 A0A087X1B8 175 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 IQCF5A8MTL0 148 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 EFCAB14O75071 495 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 SORBS2O94875 1100 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 LTA4HP09960 611 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 MC4RP32245 332 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 FPGSQ05932 587 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 MAP7Q14244 749 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PPM1LQ5SGD2 360 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 TMEM240Q5SV17 173 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 NXNQ6DKJ4 435 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 NCEH1Q6PIU2 408 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 LYSMD3Q7Z3D4 306 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 SLC15A3Q8IY34 581 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 ARHGAP24Q8N264 748 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 ELMOD1Q8N336 334 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PYDC1Q8WXC3 89 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 LZICQ8WZA0 190 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 DGCR14Q96DF8 476 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 MRPL57Q9BQC6 102 aaKnown RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 CCDC106Q9BWC9 280 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 ABCG8Q9H221 673 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 LINC00597Q9H2U6 94 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 CERS4Q9HA82 394 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 PTTG2Q9NZH5 202 aa11.64□□□□□ -0.55
SHMT2-212ENST00000554467 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 HEMK1Q9Y5R4 338 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-212ENST00000554467 C2orf81A6NN90 581 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 H3BMM5 538 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 TFAP2AP05549 437 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 STC1P52823 247 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 AQP4P55087 323 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 HTRA4P83105 476 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-212ENST00000554467 TECRLQ5HYJ1 363 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 UGT2A3Q6UWM9 527 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 NCCRP1Q6ZVX7 275 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-212ENST00000554467 TAS2R42Q7RTR8 314 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 NAT16Q8N8M0 369 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 SLC26A7Q8TE54 656 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 GCNAQ96QF7 691 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 SLC30A3Q99726 388 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 DRC3Q9H069 523 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 RBM38Q9H0Z9 239 aaKnown RBP11.63□□□□□ -0.55
SHMT2-212ENST00000554467 NLE1Q9NVX2 485 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-212ENST00000554467 ANGPTL2Q9UKU9 493 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 SH3GLB1Q9Y371 365 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 A8MT66 165 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 STX7O15400 261 aaKnown RBP11.63□□□□□ -0.55
SHMT2-212ENST00000554467 RHOBTB1O94844 696 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 APOA4P06727 396 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 SERPINA6P08185 405 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 ACVR1Q04771 509 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 RFTN1Q14699 578 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-212ENST00000554467 RALGPS1Q5JS13 557 aa11.63□□□□□ -0.55
SHMT2-212ENST00000554467 SH2D4BQ5SQS7 431 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms